| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9824 |
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| Symbol | avhB1a |
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| ID | 7379964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011986 |
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| Strand | - |
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| Start bp | 22444 |
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| End bp | 23412 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643648253 |
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| Product | type IV system transglycosylase |
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| Protein accession | YP_002546490 |
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| Protein GI | 222102349 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAACA GGGCTCGCAT GGCAGGCTTT TCAGGCACCA CCGTCCTTTT GGGGACAGCT
CTCGTCGCGC TGTGGTCGGC CAACTTTGCA TATGCCCAAG ATGCTGTAAA AAATACCAGA
ATAGCTAGCG CATACAATGG AAGCGAAGCG TCTGGATCAC CGTCACTTGC AACCAATTTC
GCTGAAAGAT GGGCTGGCGA GGCTGTTCCA GCGAAAGAAT TTGTCTTGGG CGCTGATGGC
GTAGTGAAGG ACGCGAACAA GCAAAACAGC ACGACCGAGA CTGCGGCTTC ACCAGATACT
AATATTGGCG CAACAGAAAC GCCGTATGTG GATGTGACAG GATCAATAGG CGGCTCTCCG
ACTGCTTCTC GTGCGACCGG TTCACTTAGC CAAATTGGCG CAGGAAACGT GTTAGCTTCG
CCCGTAATGG GGGCAAAAGA GTGTGGCGCA TCTCCGATGA CGCCGGACGA GATCAAAGCT
TTGGTTGTAG AGACCGCGCG CCGCCATCAG GTTGATGAGG GGTTTGCTGT GGCAATCACT
TGGGCCGAAA GCAGGTTTGA CGTGGTTCGC AACTCTCCCA AAGGAGCTCG TGGCCCCATG
CAGCTTATCC CCGATACCGC AACGAGGTTC GGCGTCGTTG ATATCTGCGA TCCACGGCAG
AACATCGAGG GTGGCATCAA GTATCTCCGG TTTCTGCTCG ATGAGTTTCA AAATCCTCTG
CTCGTAGCCG CTGCATACAA CAGCGGCGAG AACCGGATCT ACGAATATGG CGGCGTTCCG
CCCTTTCAGG AGACGGTCGG GTACGTAGCA AAAGTCCTCA ATTTTCAGCT TGGTCTTCCG
ATGCCTGTGG GCAAGCGGAA GGCCGGAAAT GTCGTCCGTG AGGCAGCGGC GACGAATACG
GCCAACGGTA GCGGGGTAAT TGCCGTTGAG AAAACCGGCA AGTTTGTCGG TGGCGTGATG
CACTTCTAA
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| Protein sequence | MENRARMAGF SGTTVLLGTA LVALWSANFA YAQDAVKNTR IASAYNGSEA SGSPSLATNF
AERWAGEAVP AKEFVLGADG VVKDANKQNS TTETAASPDT NIGATETPYV DVTGSIGGSP
TASRATGSLS QIGAGNVLAS PVMGAKECGA SPMTPDEIKA LVVETARRHQ VDEGFAVAIT
WAESRFDVVR NSPKGARGPM QLIPDTATRF GVVDICDPRQ NIEGGIKYLR FLLDEFQNPL
LVAAAYNSGE NRIYEYGGVP PFQETVGYVA KVLNFQLGLP MPVGKRKAGN VVREAAATNT
ANGSGVIAVE KTGKFVGGVM HF
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