| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9812 |
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| Symbol | avhB10 |
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| ID | 7379955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011986 |
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| Strand | - |
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| Start bp | 13519 |
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| End bp | 14727 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648244 |
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| Product | type IV secretion protein AvhB10 |
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| Protein accession | YP_002546481 |
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| Protein GI | 222102340 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCA GCCCCGAACT TGAAGCTATG GCGCAGGCTG ACGAAACGGA TGTCAGCAAC
AAGAACGCAA AACGGAACCA GACGGCCGGA ATGGCTGCTC TGGTGATTTT CGGCGTTATC
GCCGCATACA TGGTCCTTGC GACCTCGAAA GATGAGCCGC GAGATAATTC CCAGTCAGAT
GAAGAGTTTC GCACCACGAC GTTCCGGCCG CCTGGCTTCG TGCGCGATGG TGAGCCGCAA
CCTGCCCCAG AACAGCCGGT CGTCGTCTTA CCACCACCTC CGCCGCCACC CGAGCCGCCA
GCCGACACGA CAACGTTTAA CGTGCCGCCA CCACCAGTGG CTCCGCCTCC GACCGTGGAA
GTACCCAAAG TGGAGGAGTT TCCCGAGCGC TTCAGGTCAA AGCTCATCAC TATGGACCAG
AATTTGGGAG GCAACGGGAA TGGTTCGCTG GACGGGTCGG CCAGCGGCCC GCCGTTGACG
GTTGCCGGCG AGGACAAGAA TAGCCAATAC CTCTCGTCCG CGAGCGCGAT AGGAGATCGC
AGCGCCAAGG CCAGACAGCT GAAGCGCCTC GACGCTTTAG TGCCAGAAGG CACGCTTATT
CCAGGCATTC TGGAAACGGC CATCGTGAGT GATCTTCCCG GGCAGATCCG TGCTATTACA
TCTCAGGATG TCTACTCGTT CGACGGCCGG CGCGTGATCA TCCCTACAGG CACGCGCCTA
ATTGGCGAAT ACCAGTCGGA GGTTACGCGT GGACAGAAGC GTATCTTCGT CGTCTGGACA
CGCCTGATCC GTGACGATGG TGCCAGCGTG AGGCTAAACT CAATCGGAGC GGATAGCCTC
GGTCGATCAG GATTGACAGG TCACGTTGAT AACAAGTTCC GGGAGCGTTT CGGTGCTTCC
ATCCTTCTTT CGATCGTTGG TGGCGGCGCA AGCTATCTGA CGGGATATGG AAGCGAACAG
AGTTCAGGTT CCAACAATGA TGATGCGCAG CGTGGGGCGG ATCTCGCTCG CGAGACGATC
GCGCAGACGT TTAGCGACAT GGCAAACACC GTGCTTTCAG AAAATCTTCG CATCCCCCCA
ACGATCAGCG TCCCACAGGG CGAACGCATC TTCATCTTCG TGCGCCAAGA CCTCGATTTC
AGCGACATGT ACGACGATCC GGTTACAGAA GCGATGAAGG AGATCAAACG TGAACGCTCC
AGCAGGTAA
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| Protein sequence | MKRSPELEAM AQADETDVSN KNAKRNQTAG MAALVIFGVI AAYMVLATSK DEPRDNSQSD
EEFRTTTFRP PGFVRDGEPQ PAPEQPVVVL PPPPPPPEPP ADTTTFNVPP PPVAPPPTVE
VPKVEEFPER FRSKLITMDQ NLGGNGNGSL DGSASGPPLT VAGEDKNSQY LSSASAIGDR
SAKARQLKRL DALVPEGTLI PGILETAIVS DLPGQIRAIT SQDVYSFDGR RVIIPTGTRL
IGEYQSEVTR GQKRIFVVWT RLIRDDGASV RLNSIGADSL GRSGLTGHVD NKFRERFGAS
ILLSIVGGGA SYLTGYGSEQ SSGSNNDDAQ RGADLARETI AQTFSDMANT VLSENLRIPP
TISVPQGERI FIFVRQDLDF SDMYDDPVTE AMKEIKRERS SR
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