| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9808 |
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| Symbol | traA |
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| ID | 7379952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011986 |
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| Strand | + |
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| Start bp | 7399 |
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| End bp | 10161 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643648241 |
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| Product | Ti-type conjugative transfer relaxase TraA |
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| Protein accession | YP_002546478 |
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| Protein GI | 222102337 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTTCT TCTTCGGAGC GTTCACGAGT GAATGGGAGC AGAAGCGCGC AGCGCTCTTG
CATGAGATGT CACTTGGAGG AAAGGCGGCG CAATCTGAGG AAAACCTCTT CAAGTACGTC
CATCAGATTA AGGAGGTCAG GCGCGGGGGA GGTGGACCGA AGGCTAAACC TATGCGGATG
CCTCGCATGC AGTTTCCCCG GATCTCAATG CCCTCTGGTA GCGCGGCGGC TTCAGGCCGC
CCGATGGAGG CGCGACTTAC GAGCATCGCG AAGGGTAGTC AGCCAGCTGT TGTGAAAATG
GCCTCCTATG GCGGCGGTGC ACGCGTCGGA TCGATGCTCA ACTACGTCTC GCGTGGCGGT
GAGTTGAAGG TGGAGAATGA AAACGGTGAG AAACTCGAAG GTCGTGAAGA TCTTGCTCGC
GTTCGGGGCG ACTGGAACCA CCTGTTTCAG AACCGGACCG AGAGCCGAGA TATTGGAAGC
TTCTCGGTGG AGGTTGCGGC CAGTGCTGAT GGAGAGGATT TGCATGGGCG GGTGCGAGAT
ATCCTATCGA GCGGTTTTGG CGACCGTCGG TATGTTTATG CCGTTGCGGA GCGCGCTGAT
GGCTCATTGA CGATTGATGG CCTTGTCGTT CTACGAAGCG GGCAGGGTAA GAGGCTTACA
GCCGACGCCA GGGCCGCCGG GTTCGTGCAG CAAAGTTTTG ACGCAAGCGC AGTCGCAGGT
CAGGGCGCTG CGAGGTTTTC CTTCGGAGGC TATGGAAACG GTGTAGATTA CGGCACTACG
AAGGTTCGGG AGCTTATCGC GGACAGTGCC GAGGTTCGGG ATGATCGCGG ACGCTTAATA
GCAGACGGTA AGGCGGCCGG GGATCTCGTT CAAAAAGAGT GGCGCGAAGA GCTTCACAGC
CGCAAAAGCC GCGATGTGAT GCATGTCATC ATGTCGGCCC GTGGCGGAAC AGATGCAGGA
GCCTTTGAAG GCGCTGTTCG AGATTTCCTC GCTGACCAGT TTGCTGGACA TCGGTACGTC
TTTGCGATGC ACGACCCTGA AACCGACACC AAGGAAGCAG GGGAGGGGGG CAAGCGTCCG
CATGTCCATG CGCATGCTAT TGTCACGATG CGATCAGAAG CCGGGGACCG GATCGAGACA
ACGCCGGCGA CCTTCCGCCA ATGGCGTGAA GTGATGGCCG AGAAGGCGCG CGATCACGGC
ATCAATATGG AAATGACGGA TCGACGGGAG TTCGCCTCAG CGCCTGCCTA CACCCGTAAT
CAGGTTCGCG CTGTAAACCG CGACGGTAGA ACTGAGCATG TTGGAACAAG TGAACCTGCC
CAGGCTCGCT ACGATGCAAA GCGATCCGGT CGACGCACCG TAGCGTCAAG TGATCGCAGC
AGGCAGTATA CGGTCAAGGC TTTGGAGACT TGGCAGAAGA TCGCGGCGGT GGCCGGCGAT
CGCCAGACTG TCGCCTATGC GGCCGAGTAT CGCGACACGC TGCAGACCGG TCTTGCGGAT
CCGCAGGCGT TGAACAGTGG AACAGTGATC GAGGCTGATT TCGGCGGTGA TTACCGGTCC
AATATGGTAG CTTTGAATAA GATCATTTCG GAGGCAGAGG ATATGCGGGA ACAGACGAGG
CCGGAATTTG AGGTCTATGA AAAGAAAGTT GAAATCGCTC TTTTCAAGCT CGAGCGCAGT
GCCGGAACAG AAGATCGGGC CGCTTTTGAG GAAGTCGCAG AAGCGGCGCG CGAGTTCGTC
AATCTTCGCA GAGAGCTTGT CGAAATCGGA GAGCGTGATG CACTTCGAGC CAACGGGGGT
TGGACTGAGC AGGAAGATGG TGCCGATCTT GCCGAAGCGC GGGCGGCAGT CGAGACTACA
GAGCAGGCTT CGCCCGAAGA TCGATGGGAT GCCGCGGTGG CGAAATACGG CGAGCATATG
GTCGAGGTCG GCAATAACGT GTTGATGGAG ATCGAGCATC ACCGCGAAGG TATCGCGCGA
GTTGAGGCGG GAGAATTCGA CGCGTCCGAT CTCGAAAGAT ACAAAGCCGG ACTGCATGCC
GCTCTTGAAG ATGCCGCTGA CACGGCTGTT GGTGGCAACG ATTACCTCCG AGAGGTTGGC
AATAACGATC CGGAGCTGAA GGAGGCGGTC GAGTCTCTTG ATCGTCATGT GGCTGCGAAA
GAAGCAGAGG AGGTGCGTGA TGCAATTGGA AGGTGGGCGT GGAACGCCGC ATCTGAGACG
CACGGGAGCG ATGTCGTAAT TACCGGCCAC AAACAGATGG AAAACGTCAA TTATTACAGA
GACGGCCTCC AAATGATCGA CGCCGGCGAG CTATCCGAAA CGGATCGCGA GAGCTTCAAA
GCTGGCCTTG CTAAGTCTCT CGAAACAGCT GCAGAGGCTG CGGTTGAGGG CAATGGTTAC
ATCCGTGATC TTGCGAAGCA TGATCAGGAT CTGAATACAG CGATTGAAAA GCTTGAGCGT
GAAGATGGCC GGTCAGACAC CGACGGGTCC GCCAAGACAC CAGCAACCAC GGATGTTGTT
GATGAAAGAC AACGTGACCT CCAGGCAGAG ATCGAGGATG AACGCGGCCA GCCTGACGAA
CGAGAGGCCC ATGAGCTTGC CGACGTGGAG GCTACTCACA AGCAGCAGGA TCGTGTAAAC
AAGGAGAGAG GTGGCGAAAC CACGCGGACG GATCCTGCAC AACAGCACGT TCCTCGTCTT
GAGGAGCTTG AGCGTGAACA GACGGAGCAA AGGAAGCGCG ATCGAGACGA TCGCGAGCGG
TGA
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| Protein sequence | MEFFFGAFTS EWEQKRAALL HEMSLGGKAA QSEENLFKYV HQIKEVRRGG GGPKAKPMRM
PRMQFPRISM PSGSAAASGR PMEARLTSIA KGSQPAVVKM ASYGGGARVG SMLNYVSRGG
ELKVENENGE KLEGREDLAR VRGDWNHLFQ NRTESRDIGS FSVEVAASAD GEDLHGRVRD
ILSSGFGDRR YVYAVAERAD GSLTIDGLVV LRSGQGKRLT ADARAAGFVQ QSFDASAVAG
QGAARFSFGG YGNGVDYGTT KVRELIADSA EVRDDRGRLI ADGKAAGDLV QKEWREELHS
RKSRDVMHVI MSARGGTDAG AFEGAVRDFL ADQFAGHRYV FAMHDPETDT KEAGEGGKRP
HVHAHAIVTM RSEAGDRIET TPATFRQWRE VMAEKARDHG INMEMTDRRE FASAPAYTRN
QVRAVNRDGR TEHVGTSEPA QARYDAKRSG RRTVASSDRS RQYTVKALET WQKIAAVAGD
RQTVAYAAEY RDTLQTGLAD PQALNSGTVI EADFGGDYRS NMVALNKIIS EAEDMREQTR
PEFEVYEKKV EIALFKLERS AGTEDRAAFE EVAEAAREFV NLRRELVEIG ERDALRANGG
WTEQEDGADL AEARAAVETT EQASPEDRWD AAVAKYGEHM VEVGNNVLME IEHHREGIAR
VEAGEFDASD LERYKAGLHA ALEDAADTAV GGNDYLREVG NNDPELKEAV ESLDRHVAAK
EAEEVRDAIG RWAWNAASET HGSDVVITGH KQMENVNYYR DGLQMIDAGE LSETDRESFK
AGLAKSLETA AEAAVEGNGY IRDLAKHDQD LNTAIEKLER EDGRSDTDGS AKTPATTDVV
DERQRDLQAE IEDERGQPDE REAHELADVE ATHKQQDRVN KERGGETTRT DPAQQHVPRL
EELEREQTEQ RKRDRDDRER
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