| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9268 |
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| Symbol | trbC |
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| ID | 7367864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 209367 |
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| End bp | 209771 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643644427 |
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| Product | conjugal transfer protein TrbC |
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| Protein accession | YP_002542724 |
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| Protein GI | 222083321 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGCATA AGACCAGGAT TACCGTTGCG CTTGCGGCAT TCGCCGCCAT CTCCAGCGTC
ATTCTGGCGG ATCCGGCCTT CGCCTCTTCA GGCGGTAGTC TGCCCTGGGA ATCTCCGCTG
CAGCAGATCC AGCAGTCCAT CACCGGGCCG GTTGCCGGCT TCATCGCGCT CGCGGCGGTC
GCCATCGCTG GTGGTATGCT GATTTTCGGG GGCGAGTTGA ATGACTTCGC AAGGCGGCTT
TGCTACGTCG CCCTCGTTGG CGGCGTGTTG CTCGGCGCGA CCCAGATCGT CGCACTCTTC
GGTGCGACCG GCGCTTCGAT CGGCGAGATA GAGGCCCGAA CCAGATCTGG GATCGCCGAA
CAGTCAGCAA CACTTCGACC GGAAGGGGAG GGGGCTCATG GCTGA
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| Protein sequence | MSHKTRITVA LAAFAAISSV ILADPAFASS GGSLPWESPL QQIQQSITGP VAGFIALAAV
AIAGGMLIFG GELNDFARRL CYVALVGGVL LGATQIVALF GATGASIGEI EARTRSGIAE
QSATLRPEGE GAHG
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