| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9259 |
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| Symbol | trbG |
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| ID | 7367857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 202858 |
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| End bp | 203748 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643644420 |
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| Product | conjugal transfer protein TrbG |
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| Protein accession | YP_002542717 |
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| Protein GI | 222083314 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGGACCGCG CAGCTTTGAA AGGCATGGCC CCGAACATGA ACATTCGACT GAGACGTTTT
TCGGTCACCC TGACTGCTGC AACGATCCTC GCCGTCATCG TGCCGTTTTC GGCTTTTCTT
TCCTCACGCG CGCTCGCAGC CGATGGCGTC ACCGCCAATG AGGCGAAGGG GATGGGAATT
TCCACCCAGT GGCGCGGATC ACGCGGACTT GTCACGAAAG GACCGGACGG GAAGGTGATC
TTCCTCTACG GCGAGGTGCA GCCCTCCGTG GTTTGTTCGC CCTTGCAGGT CTGCGATATC
GAGCTCCAGA GCGGCGAGGT GGTTCGCGAC GTGCTGGTCG GCGACACCGT CAGGTGGAAG
GTCGAGCCCG CAACGTCAGG AGCGGCGGGA GGGCAGGCGA TCCACCTGAT CGTCAAGCCA
TCCGAGCCGA ACCTTGTCAC CTCGATGGTG GTGACAACCT CGCGCCGCAC CTATCACATC
CAGCTCAAGT CGCATGCAAA CCAATACATG GCCCGCGTCG GCTTCGAATA TCCGGAAGAC
GTTTCCACCA AGCTCGCTGA CATCAACGCG CGGATGGAGG CAAGCACGAT CCCCGGCACC
GGCGTCCCGG CCGAGCAGTT GAATTTCTCG TATTCGGTCT CCGGCAATGC CGGCTGGCGG
CCGACACGGG TCTATAGTGA CGGGGAAAAG ACCTACATCC AGTTCCCGCG CTCGATCTCC
AGCCAGGACG CGCCGGTTCT CTTTGTCGTC TCGGGAGGAC AGAACCGCAT CGTCAACTAC
CGGATGAAGG GTGACATGAT GGTGGTCGAC TATCACGTCG ATCGTGCGGT CCTTGTTTCC
GGCGTCGGCT GGAAACAGGA GAAGGTGACG ATCCGGCGGG GAGGGCGGTG A
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| Protein sequence | MDRAALKGMA PNMNIRLRRF SVTLTAATIL AVIVPFSAFL SSRALAADGV TANEAKGMGI
STQWRGSRGL VTKGPDGKVI FLYGEVQPSV VCSPLQVCDI ELQSGEVVRD VLVGDTVRWK
VEPATSGAAG GQAIHLIVKP SEPNLVTSMV VTTSRRTYHI QLKSHANQYM ARVGFEYPED
VSTKLADINA RMEASTIPGT GVPAEQLNFS YSVSGNAGWR PTRVYSDGEK TYIQFPRSIS
SQDAPVLFVV SGGQNRIVNY RMKGDMMVVD YHVDRAVLVS GVGWKQEKVT IRRGGR
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