| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9257 |
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| Symbol | trbI |
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| ID | 7367855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 201057 |
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| End bp | 202370 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643644418 |
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| Product | conjugal transfer protein TrbI |
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| Protein accession | YP_002542715 |
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| Protein GI | 222083312 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0531878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCAAT CGCTCAAGCT CGGCGGCACT GTCAACGAGG AGACAGGCCC CGGCATGCGC
CGGATAAACC GTCTCCCGAT CATCGTCGTG GTCGTGCTGG TGGTCGCCTT CCTCGCGGTC
ATCTTCTACG GCCTGTCGTC GCGCGGGCTA TATTTCCGCG ATACCGGACC GGACACAAGC
TCCGGCAATC CGGCGTCGAC CTTCGCCGAT CAGATCAAGC GTGGCGTTTC CGACGGCATC
ATCGGCGAGC CGCAGCAGGT GACGACGCTG CAGCCGACGC CGGTCGAGAC GCAAGAGGAG
AAGCGCTCCG TCAATCCGTT CACACCGCAG CCCGGTCAAA GGGAAGAGGC ACGGCCGGAA
CAGCAACTGG AATCTGAAAA GGTCTGGCGC GCCCGTTTGC AGCGCGAGCA GGAAGAGCAA
TATCTTCGCG AGCGGCAGCG CCAGAGAATG GCCCGGCTGC AGGCCAATGA CGCCGCCTAT
GATTCGCCGA TCGCTGTCGA TCGCGGAAAG TTCGACAAGC GGGGAGCGGA CACAAACGAC
ACGGCGGCCG CGACGACGAA TGGCGTTTCC ACTGCAATGA CACCTGGCGC ATCCGACCTG
TACGCAGCCG CTGTTCGTGC GGGTCTTGGC GGGCAAAATG TTGATCCTAA CGGCCAGAAG
TCCAAGGAGG ACTTCTTTAA TGCCGACCTC AAGGAACTTG GCTACCTGCC AAACCGTGTC
GTCCCCCAGC AGTCGCTTTA CGAACTCAAG CGCGGCTCGG TTATTCCCGC GACATTGATC
ACCGGGATCA ATTCCGATCT TCCCGGTCGC ATCACCGCCC AGGTGAGCCA GAACGTCTAT
GACTCAGCTA CGGGACATCG GCTCCTGATC CCGCAGGGAA CGAAACTGTT CGGCCGTTAT
GACAGCAAGG TGTCGTTCGG CCAGAGCCGT GTTCTGGTCG TCTGGACCGA CATCATCTTC
CCGAACGGCT CGACGCTTCA GATCGGTGGC ATGGCTGGCA CAGACGCGCA GGGCTACAGC
GGTTTCCGCG ACAAGGTCGA CCGCAAGTGG CTTCAGACCT TCGGCTCGGC CATCCTCATT
GCGGTAATCG GCACCGGGAT CGATATGGCT GTACCGCAGA GCTCGACGCT GGCGACGCAG
GATACTGCCT CGGATGCGGC GCGGAGGAAT TTCGCGGAAA CCTTCGGCCG TGTCGCAGAC
CGAACTATAC AGAGAAACAT GGACGTCCAG CCGACGCTGG AGATCCAACC TGGCTACAGG
TTCAACGTCC TTGTCGATCA GGACATTGTT TTTCCAAGCG CTTACAGAAA CTAA
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| Protein sequence | MVQSLKLGGT VNEETGPGMR RINRLPIIVV VVLVVAFLAV IFYGLSSRGL YFRDTGPDTS
SGNPASTFAD QIKRGVSDGI IGEPQQVTTL QPTPVETQEE KRSVNPFTPQ PGQREEARPE
QQLESEKVWR ARLQREQEEQ YLRERQRQRM ARLQANDAAY DSPIAVDRGK FDKRGADTND
TAAATTNGVS TAMTPGASDL YAAAVRAGLG GQNVDPNGQK SKEDFFNADL KELGYLPNRV
VPQQSLYELK RGSVIPATLI TGINSDLPGR ITAQVSQNVY DSATGHRLLI PQGTKLFGRY
DSKVSFGQSR VLVVWTDIIF PNGSTLQIGG MAGTDAQGYS GFRDKVDRKW LQTFGSAILI
AVIGTGIDMA VPQSSTLATQ DTASDAARRN FAETFGRVAD RTIQRNMDVQ PTLEIQPGYR
FNVLVDQDIV FPSAYRN
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