| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9240 |
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| Symbol | |
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| ID | 7367844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 189540 |
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| End bp | 190220 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643644407 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002542704 |
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| Protein GI | 222083301 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.341088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGATTC TCACCAATCC CCAGTATCTT GGGGAGATCG CGCTTGGCCT AAAAATGACA
GTCATACTCG CCGTCGCGAG CTGGCTGATC GCCATTGGGT CCGGGATACT GCTTGCGATC
ATTCGCGTTT CTGCGCCTCG ATCGATCGAC GCCGCCGCCG CCGCCTGGAT CGAATATCAG
CGCAATGTCC CGGTCATCGT GCACATCTTC GCGTGGTACT TCGGTGTTAG CACCATTTTC
CCTCTGCCGG CACAGGACTG GTTCAATGCA AACAATGGTG ACGTGATCTT CGCCGCCGTA
GCAATTGGCC TCTACTACGG AGCCTATATC TGCGAAGATA TCCGTAGTGG CTACCGCTCG
ATTTCTCGCG GCCAGTATGA GGCCGCGAGA TCCATCGGCC TGAACTTCCG GCAGTCCTTG
CATCACGTGA TGATGCCACA GGCAGTGAGG GCTTCCCTGC CAGCACTGAT CAGCCGTGCG
ATCCTGCTCC TGAAATCGAC CAGCCTTGCG ATGGTGATCG GTGTCATGGA ACTTACCTAC
CAGACAAAGG AAATCCAGAA CGAGACGTTC TTAACTTTCC AGGCGTTTTC GATCGCGACT
ATTATCTACC TAGTCCTCTC GATGGCGGTC ATCCTGCTCG GCAAGGTCAC CGAGCATTAC
ATGGAAGTGG GGACTGCCTG A
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| Protein sequence | MEILTNPQYL GEIALGLKMT VILAVASWLI AIGSGILLAI IRVSAPRSID AAAAAWIEYQ
RNVPVIVHIF AWYFGVSTIF PLPAQDWFNA NNGDVIFAAV AIGLYYGAYI CEDIRSGYRS
ISRGQYEAAR SIGLNFRQSL HHVMMPQAVR ASLPALISRA ILLLKSTSLA MVIGVMELTY
QTKEIQNETF LTFQAFSIAT IIYLVLSMAV ILLGKVTEHY MEVGTA
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