| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9239 |
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| Symbol | |
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| ID | 7367843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 188833 |
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| End bp | 189540 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643644406 |
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| Product | ABC transporter membrane spanning protein (amino acid) |
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| Protein accession | YP_002542703 |
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| Protein GI | 222083300 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.355245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAC TCATTGAACA GAATTGGAAA TTCTTCCTTA TCGGCCAATA TCCTTACGGT
CCGCTCGGGG GGATAGCAGG TACGATATGG CTGTCTATCC TGAGCGTATG TTTCTGCTTC
CCGGTCGGCT TGCTGCTAGC TCTGTCCCAG ACGTCGTCTA TTGGCTGGCT GAAGCAGGTA
TCATCGACCA TCTCATCTCT AATCCGGAGC ATTCCGTTAG TAATGCTGAT CTTCTGGGTC
TACTTCTTGT TACCAAAGCT GACGGGCTAC GCCATCACGG GCTTCACCAC AATGCTGGTA
ACACTCACCC TGTTCCAGGG GGCCTATATG GGCGAGATTC TCAAGGCAGG AATCATGTCG
CTACCGAGGG GGCAGATCGA GGCAGCCCGT TCGATTGGTC TTAGCTACAG CCAGGCGCAG
ACCGATGTGA TCCTGCCGCA AGTGCTCTAC AACATGGCTC CGAGCATCAT TAGCCAGCTT
GTAGCCACAA TCAAAGACAC CTCGCTTGGC TATATCATCG GCGTCCAAGA GTTGATGTAT
GCCGGAAGCC AGGTGAACAG CTCTGTCATG GTGAAGCCGC TGCAGGTCTT CGCGATCACT
TCGGCAGGTT ACTTCATAAT CTGTTTTTCA CTTAGTTCCT TTACCCGCTA CCTCGAGCAC
CGCATCACCA ACCGCCGCAA CCCAAACAAG ATCGCGAGTG TGTCATGA
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| Protein sequence | MIELIEQNWK FFLIGQYPYG PLGGIAGTIW LSILSVCFCF PVGLLLALSQ TSSIGWLKQV
SSTISSLIRS IPLVMLIFWV YFLLPKLTGY AITGFTTMLV TLTLFQGAYM GEILKAGIMS
LPRGQIEAAR SIGLSYSQAQ TDVILPQVLY NMAPSIISQL VATIKDTSLG YIIGVQELMY
AGSQVNSSVM VKPLQVFAIT SAGYFIICFS LSSFTRYLEH RITNRRNPNK IASVS
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