Gene Avi_9229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9229 
Symbol 
ID7367836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011984 
Strand- 
Start bp181736 
End bp182365 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content58% 
IMG OID643644401 
Producttranscriptional regulator TetR family 
Protein accessionYP_002542698 
Protein GI222083295 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.21864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGTCG CCATAGCGGC GTCAAGAGAA ATGTGTTATG CTCACGGCAT GACACGTAAA 
ACTGACGCCC GCGCTAGCGC GATTGCCACG GCCCAACGCC TGTTTCGCAT CCAAGGCTAC 
ACTGCGACTG GATTGACCCA GATCCTTGAA GAAAGCGGTG CGCCTAAAGG ATCGTTCTAC 
TTTCACTTTC CACGAGGCAA GACACAGCTC GCAGAAGAAG CAATCGATCA ATACGTTGCG 
CGTAGAATGG CTGTATTGCG GGATATCTCG GCGCATACGA CGGGAGATGC CCTGAGCTTT 
GTTCATCGAC TCTTCGATAC ATTCGCGGCC GAGATGGTCA CCTCCGACTT CCAGTACGGA 
TGTCTCATGC AAAACCTGGC GAACGAACTG CCCGCGCTCG ACGCGGAGCT GACCAAAAGG 
GTCGCGCGCG GATTTGTTGA TTCGACCGAG ATTGTTGCGG AGCATTTTAC GGGGTGCGGT 
TTCGCTCCCA CGCGCGCATC CTCTACCGCA GCCGCATTGG TAGCCGCCCT CGAAGGCGCG 
CGAACGATCG CCCGCTTGGA ACGCACGCCT TCCATATTCG AGGCGCTGGC GGATGTTAGT 
GTCCGGGGGT GGGCTGTCCC CGAGGGGTGA
 
Protein sequence
MVVAIAASRE MCYAHGMTRK TDARASAIAT AQRLFRIQGY TATGLTQILE ESGAPKGSFY 
FHFPRGKTQL AEEAIDQYVA RRMAVLRDIS AHTTGDALSF VHRLFDTFAA EMVTSDFQYG 
CLMQNLANEL PALDAELTKR VARGFVDSTE IVAEHFTGCG FAPTRASSTA AALVAALEGA 
RTIARLERTP SIFEALADVS VRGWAVPEG