Gene Avi_9219 details

Gene Information

• Locus tag: Avi_9219
• Symbol: pntA
• ID: 7367750
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011984
• Strand: +
• Start bp: 172654
• End bp: 173796
• Gene Length: 1143 bp
• Protein Length: 380 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643644393
• Product: NAD(P) transhydrogenase alpha subunit
• Protein accession: YP_002542690
• Protein GI: 222083287
• COG category: [C] Energy production and conversion
• COG ID: [COG3288] NAD/NADP transhydrogenase alpha subunit
• TIGRFAM ID: [TIGR00561] NAD(P) transhydrogenase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCTTTA TTTTATCCGT CCTCCGAGAA ACGCGCCAAG GGGAAAAGCG GGTCGCACTG 
GCGCCGTCCG TCGCCTCACG GCTCAAGCCA CTCGGCGCCG ATGTCCGGAT CGAAACCGGC 
GCCGGCGCGG CCGCAACCTT TTCAGATGCC ACCTTGGCTG ACTGCCGAAT CGAAGACGAT 
CAGCAAACGC TTCTTGGCAA TGCCGATATC GTACTTGCCG TGCAGCCCCC GTCAGTTAAG 
GCGGTGACGC TGATGAAACC AGGCGCGGTG CTCATATCGT TCATCTATGG CGAGACGTCA 
CCCGATCTCG TCAGAACGCT TCGGGATGGC AAGATCACCA GTTTCGCAAT GGAGCAGATT 
CCGCGCATTA GCCGGGCGCA GGCGATGGAC GCGCTGTCGA GCCAGGCCGC ACTCGCCGGC 
TATTACGCGC TGTTGCTTGG CGCCGTTCAT ATGCCCCGCA TTCTGCCGAT GATGACGACC 
GCGGTCGGTT CGCTACGCGC CGCCAAAGTG CTGGTGTTGG GTCTCGGCGT CGCCGGGCTT 
CAGGCGCTTG CAACGGCTCA TCGCCTTGGT GCGATCACCG AAGGCTATGA CGTCCGGCCG 
GAGACCAAGG AACAAGCCCT TTCGCTTGGT GCGAAGTTCG TCGAAACGGG CGTCGATGCC 
CGTGGCGAAG GCGGCTATGC CCGTGAGTTG ACGGCCGAGG AAAAGGCCAA GGCTCAGACG 
GCACTCGACA AGCATATCGT CGAGGCCGAC ATGATCATCA CCACGGCGTC GGTTCCCGGC 
CGTCCGGCCC CCAAGCTCAT CACGGCTGCA CAAATCGCAG CCATGAAGCC TGGCGCCGTC 
ATCGTCGATC TTGGCGCGGA AGGCGGCGGC AACTGTGAAG GCACGCGCCC TGGCGAAACC 
GTCACAGCCG GACCCGCCAC CATTCTCGCC CCCCTGAACG TGCCCTCGAT GCTCGCCCAG 
CATGCCAGCG AACTCTATGC CAAGAACCTG TTCCACTTCG TCCAGTTGAT CGTCAAGGAT 
GGCGCCGTGC ATCTCGACTT CGACGACGAG ATCGTCGCCG GCACCGTGCT CACCCATGAC 
GGCGTCATTC GCAACGCTGC CGCCCGCATG GCGGCCGAAG CTACCGAGGA GAAGGTCGCA 
TGA 

 

Protein sequence

MAFILSVLRE TRQGEKRVAL APSVASRLKP LGADVRIETG AGAAATFSDA TLADCRIEDD 
QQTLLGNADI VLAVQPPSVK AVTLMKPGAV LISFIYGETS PDLVRTLRDG KITSFAMEQI 
PRISRAQAMD ALSSQAALAG YYALLLGAVH MPRILPMMTT AVGSLRAAKV LVLGLGVAGL 
QALATAHRLG AITEGYDVRP ETKEQALSLG AKFVETGVDA RGEGGYAREL TAEEKAKAQT 
ALDKHIVEAD MIITTASVPG RPAPKLITAA QIAAMKPGAV IVDLGAEGGG NCEGTRPGET 
VTAGPATILA PLNVPSMLAQ HASELYAKNL FHFVQLIVKD GAVHLDFDDE IVAGTVLTHD 
GVIRNAAARM AAEATEEKVA