| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9217 |
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| Symbol | |
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| ID | 7367748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | + |
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| Start bp | 168165 |
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| End bp | 170906 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643644391 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002542688 |
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| Protein GI | 222083285 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.808205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACGG CGAACGATCC AATCGCCCGG ATCTCCGGCG TGTCCCATCA CTTCGGCAAG
CTCCAGGCGC TGCGCGACGC GTCCATTGAC TTGCCGGCTG GGCAAATGGT CGCCTTGATT
GGCCCTGACG GAGCCGGCAA ATCGACATTG CTCGGCCTGA TCGCCGGCAC ACGCAAGATC
CAGACGGGGA CTATTCGTGT GCTGGGCGGC GACATGGGAG ATGCGGCCCA TAGGCGCGAC
GTCTGCACAC AAATCGCTTA TATGCCGCAA GGCCTGGGCA AAAACCTCTA TCAGGAAATC
AGCGTCGCGG AAAACCTCGC CTTTTTCGGC ACACTGTTCG GCCTCTCCAG CCAGGAGCGC
GCCATTCGTA CAGAGAGGCT GGCGACCGCC ACCGGACTGC TCGCCTTTTT GGATCGTCCC
GCCGGCAAGC TGTCAGGGGG AATGAAGCAA AAGCTCGGCC TCTGCTGCGC CCTGATCCAT
GATCCCGATC TTCTTATTCT CGACGAACCG ACAACGGGCG TCGACCCGCT TTCGCGTCGC
CAATTCTGGA CGTTGATTGC CGACCTCAGA CGCGAACGGT CAAGCATGAG CGTGATCGTC
TCAACCGCCT ATATGGACGA GGCGAGCGAA TGCGATTGGC TCGTCGCCAT GGACGAGGGC
AGGATCCTCA CCTCTGGTAC GCCTGCCGAA TTGCGCGCCT CCACGGGCGA GCAGGATCTC
GAAGCAGTCT TCACCGCCCT CCAGGCGGGC GAGAAGACCG TGAAAGCCCC CCTGGTCATC
CCGCCGCGGC CCAGCAGCAC GGAACCGCCC ATCATCGTGG CGAAGGAGCT GACCTGCCGT
TTTGGCAAGT TCACCGCTGT GGACCGCGTC AGCTTTACGA TCGAAAAGGG TGAAATCTTC
GGCTTTCTCG GCTCGAACGG CTGCGGCAAG ACCACGACCA TGAAGATGCT GACCGGGCTT
CTGGCACCAA GCGAAGGAGA GGCCACGGTT TGCGGCAAGC TGGTTGACGC CCACGATCTA
TCGATACGCC GGCGCGTGGG CTTCATGTCG CAGTCCTTCT CGCTCTATGG CGAATTGACG
GTGCGGCAAA ACCTGCTTCT GCATGCACGC CTGTTCCACC TGCCCGAAGC AGACGCAAAA
GTCCGCATTG AGAAGCTCGT GACGGACACC GGTCTTACCG GTTATGCCGA TTCCGAGGCC
GGATCGCTGC CGCTCGGCGT CCGGCAGCGT CTGTCGCTGG CGGTGGCGAT CGTGCATGAT
CCCGAACTTC TGATTTTGGA CGAGCCAACC TCCGGCGTCG ACCCGCAGGC GCGGGACGAA
TTCTGGCGGC TGCTTGTCGA TTTGTCGCGC AACCGAGGCG TCACGATCTT CGTGTCGACG
CATTTTATGA ACGAGGCGAT GCGGTGCGAC CGCATCTCGT TGATGCATGC CGGCCGCGTG
CTTGTCTGCG ATGCACCTGA AGCAGTCATC GCCTCTCGCC GCGGCGCCAA TCTGGAGGAA
GCGTTCATCT CCTACATAGA GGAGGCAGAA TCATCCCAGT CCTCCAATCC GGCGACGGCC
CCCTCGACAA CGATCGTGGC GAGCGCAGAG CCGCTTTCTC CAGCAAAGCC TGCATACATG
CCGCTTCGGC GCCTCCTGGC ATACTCGCAA TGCGAGACCC GGTCTCTGTT GCGTGACCCG
ATCCGCCTCG CCTTCGCCTT TCTCGGCTCT TTCGTCATGC TTCTGATCTT CGGCTTCGGC
ATGTCCAACG ATGTGACCAA TCTCACCTTC GCAGCGCTCG ACCATGACAA CACGCCGGAA
AGCCGCTCCT ATCTAGCCAA TTTCTCCAGT TCTAATTATT TCGTAGAGAA ATCCGCGATT
GGCAGTCTCC AGGAACTGGA AGGCCGCCTA CGCTCCAACG ACATCACGCT TGCCATCGAA
ATTCCTCCCA ACTTCGGCCG GATGGTCAAG CGCGGCGACG ACTGGCAGGT GTCTGCCTGG
ATCGATGGCG CCAACACCTC ACGCGCAGCT ACGATCGAGG GCTATGTCGA GCAGGCACAC
AACCTCTTCT CTGATGAGCG GGAACGGGAG TCGAGTTCAC CCTCGACATC GGAAGCAAGC
ACCTCGATCC AGGTCCGCTA CCGCTACAAT CCGACAGCGG AGAGCATATA CGGAATAGGC
CCATCTGTGC CGGCAATGCT GCTTATGATG TTCCTCGCTA TCCTGATGGC GGTTAGTGTG
GCGCGGGAAA AGGAAATCGG CACGATCGCA AACTTCTACG CCACGCCGAC GACACGGCTC
GAATTTCTGC TTGGAAAACA ACTCCCCTAT ATCGGCGTTG GCATGGCCAA CTTCGCGATC
ATGACCATTA CCGTCTGGCT GCTGTTCGGC GTGCCTCTCA AGGGAAGCGT CGTGGCGCTG
ACATTGGGCG CCCTGCTCTA TACGGCCGCC GCTTCTGGCT ACGGACTTTT CATTTCGAGC
TTCACCAAGA GCCAGGTCGC CGCCGTCTTC GCGGCGGCGG TGCTGTCGCT ACTGCCGACC
ATGCAGTTCT CGGGAATGAT GCAGCCGGTT TCGACCCTTG AAGGCGCCGC GCGGCTGATG
GGCAATCTGT GGCCGACATC TTATTACATG CAGATCAGCG TCGGCGCTTT CACCAAGGGG
CTCGGCTTCG GCGACCTCTC CAAGGACCTG CTCCTGCTTA CCCTGTTTGC GCCGGCCTTC
CTCGTGCTCT CCCTGTTCTT CCTGAAGAAG CAGGAGAAAT AG
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| Protein sequence | MATANDPIAR ISGVSHHFGK LQALRDASID LPAGQMVALI GPDGAGKSTL LGLIAGTRKI
QTGTIRVLGG DMGDAAHRRD VCTQIAYMPQ GLGKNLYQEI SVAENLAFFG TLFGLSSQER
AIRTERLATA TGLLAFLDRP AGKLSGGMKQ KLGLCCALIH DPDLLILDEP TTGVDPLSRR
QFWTLIADLR RERSSMSVIV STAYMDEASE CDWLVAMDEG RILTSGTPAE LRASTGEQDL
EAVFTALQAG EKTVKAPLVI PPRPSSTEPP IIVAKELTCR FGKFTAVDRV SFTIEKGEIF
GFLGSNGCGK TTTMKMLTGL LAPSEGEATV CGKLVDAHDL SIRRRVGFMS QSFSLYGELT
VRQNLLLHAR LFHLPEADAK VRIEKLVTDT GLTGYADSEA GSLPLGVRQR LSLAVAIVHD
PELLILDEPT SGVDPQARDE FWRLLVDLSR NRGVTIFVST HFMNEAMRCD RISLMHAGRV
LVCDAPEAVI ASRRGANLEE AFISYIEEAE SSQSSNPATA PSTTIVASAE PLSPAKPAYM
PLRRLLAYSQ CETRSLLRDP IRLAFAFLGS FVMLLIFGFG MSNDVTNLTF AALDHDNTPE
SRSYLANFSS SNYFVEKSAI GSLQELEGRL RSNDITLAIE IPPNFGRMVK RGDDWQVSAW
IDGANTSRAA TIEGYVEQAH NLFSDERERE SSSPSTSEAS TSIQVRYRYN PTAESIYGIG
PSVPAMLLMM FLAILMAVSV AREKEIGTIA NFYATPTTRL EFLLGKQLPY IGVGMANFAI
MTITVWLLFG VPLKGSVVAL TLGALLYTAA ASGYGLFISS FTKSQVAAVF AAAVLSLLPT
MQFSGMMQPV STLEGAARLM GNLWPTSYYM QISVGAFTKG LGFGDLSKDL LLLTLFAPAF
LVLSLFFLKK QEK
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