| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9216 |
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| Symbol | |
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| ID | 7367747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | + |
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| Start bp | 167092 |
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| End bp | 168162 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643644390 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_002542687 |
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| Protein GI | 222083284 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGTCAA CTGGTCCCGC ATCACGGGCT GGTTCTCGGA AAGACGTCGC GCCCATGAAC
ATACTCCCTC TGGTGAGAAC AAGCTTGCTG ATATCGATCC TGCTCCTGGG CGCTGGGGGC
ACTGGTGCCT GGTATTGGTG GCAGAGCCGG CAAGACCAGC TGCCGGAGGG GCTGGTTTCC
GGAAACGGGC GCATCGAATC TGATCAGGTC GAGATTTCTG CAAAGTCTGC CGGGCGCGTT
CAAAAGGTGC TCGTACAGGA AGGAGATCTC GTTTCACCCG GGCAGGTGCT CGCCTATATC
GACACGACGG AATTGCAGGC CTCCCGCGCA AAATACGTAG CAGACTTGGC AACGCAGGAA
GCATCGATGC TTGAGGCCAA GGCGACAGTC GTCCAGCGGC AAGCGGAGCT CACGCTCAAG
GAAGCCAATC TGCGGCGGGC GCTCAATACC ATCCAAAACG GCGCAATCAG CCAAAAGGAG
CGTGACGAGG CGCAGAGCGA GCATGACTCT GCAAAGGCAA TTCTGGACGC TTCGGAAAAG
AGCGTGACCG CCAGCGAACG TTCTATCGAT GCGGCGCAAG CGCTCATCGA CCAGATCGAT
GCGCAGATTG CGGATGCCGC GCTTGCGGCG CCGGTGAAGG GGCGCGTCCT CTATCGGCTG
GCAAATCCTG GAGAGGTTGT GAGCGCAGGA GGCAAGGTTC TCACGATCAT CGATCTCGCC
GAGATCTTTA TGGAAATCTA CTTGCCCCTG GAACAGGCAA TGCGTGTGCC TATCGGTTCG
CAGGCCCGCA TCCAGTTCGA CGGTGCCGAT TTCGCAATCC CCGCCAAGGT CAGCTTTGTC
TCTCCGGAAG CCCAGTTCAC GCCGAAGCAA GTCGAGACGC GCAACGAGAG GGACAAGCTG
GTCTTCAGGC TCAAGCTCCG CGTCCCGCCA AGTCTGACCC AAAGCCACAT AACAATGGTG
AAGACGGGAG CGCGCGGGGT TGGCTATGTC CGCCTTGACC CGACCCCTCC CAACTGGCCC
GATTCCCTCC AAAAGCGTTT CCAAGGCGAT CCGATCGACG CGGGGGATTG A
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| Protein sequence | MQSTGPASRA GSRKDVAPMN ILPLVRTSLL ISILLLGAGG TGAWYWWQSR QDQLPEGLVS
GNGRIESDQV EISAKSAGRV QKVLVQEGDL VSPGQVLAYI DTTELQASRA KYVADLATQE
ASMLEAKATV VQRQAELTLK EANLRRALNT IQNGAISQKE RDEAQSEHDS AKAILDASEK
SVTASERSID AAQALIDQID AQIADAALAA PVKGRVLYRL ANPGEVVSAG GKVLTIIDLA
EIFMEIYLPL EQAMRVPIGS QARIQFDGAD FAIPAKVSFV SPEAQFTPKQ VETRNERDKL
VFRLKLRVPP SLTQSHITMV KTGARGVGYV RLDPTPPNWP DSLQKRFQGD PIDAGD
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