Gene Avi_9214 details

Gene Information

• Locus tag: Avi_9214
• ID: 7367745
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011984
• Strand: +
• Start bp: 165466
• End bp: 166023
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643644389
• Product: transposase for insertion sequence
• Protein accession: YP_002542686
• Protein GI: 222083283
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3547] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATATT ACGTTGGATT GGACGTCAGC CTCAAGAGCA CACACATCTG CGTTATGAAC 
CAGGATCGGC GTGTAGTATG GCGCGGGATC GCGGATACAC AGCCGTCGAT GATTGCCGAG 
CGGCTGGCGA GATGGAAAGT GCATCTTGCA AAAGTCGGGC TTGAGACGGG CTCGATGACG 
CCTTGGCTCT ACCACGAACT GAAGGATCTG GTTTTTCCTG TCGTCTGCAT GGATGCGCGG 
CGTGCCGCCG ATGCGCTGAA GGCACGGCCT GAGAAGACGG ACAAGGCGGA TGCGCAGGCG 
CTTGCCGAGA TGTTGGCGAG CGGCTGGTAT TCACCGGTGC ATGTGAAGAC GATGGAAAGC 
CATCGGCTGA AGGCTTTGCT TGGCGCGCGT GAGCAACTGG TCAATGTGAA GCGCCAGCTT 
TACGGGCAGG TCCGCGGTCT CTTGCGCCCG TTTGGCATCA AGATCTCGGC GCGCGCCGGG 
GCTAAGCGGT TTGACGAGGA GGTCCGGTCT GCCTGCAACC GTCAGATGCG CTCTATATCG 
GTGTCGCGGC ACTTCTAG 

 

Protein sequence

MEYYVGLDVS LKSTHICVMN QDRRVVWRGI ADTQPSMIAE RLARWKVHLA KVGLETGSMT 
PWLYHELKDL VFPVVCMDAR RAADALKARP EKTDKADAQA LAEMLASGWY SPVHVKTMES 
HRLKALLGAR EQLVNVKRQL YGQVRGLLRP FGIKISARAG AKRFDEEVRS ACNRQMRSIS 
VSRHF