Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9196 |
Symbol | |
ID | 7367734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011984 |
Strand | - |
Start bp | 152864 |
End bp | 153658 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643644379 |
Product | hypothetical protein |
Protein accession | YP_002542676 |
Protein GI | 222083273 |
COG category | [S] Function unknown |
COG ID | [COG1809] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.976387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAG CTTTTCCAGT CCCAACGTTT GAACTAAAAC CCCGCGGCCT CCACCAGACC TGGTTGAAGG ACGTCGGCTT TGACGAGGCG CCTTACTATG TCGAACGTAT GGGTCTGATC GAACTGGAGG ATTTCCTTTC AGTCGCCGGC GAGCGCCTGG ACTATGTCAA GGTCGCGACC CGGCAGGTTA TCGAGCACCC AGAGGCATGG GTTCGACGCA AGGTCGAACT TTACCAGCGC TTCGGAGTGG AGCCCTACCT TGACCACAGC TATTTCCACT ACGCATACCA GCAAGGCAGC GTCGAGAAGG CGATTGAGGC AGGACGCACA CGCGGCTTCA AGGCGATCGA ATTTATGAAC ACCTTCGGCG ATGTGCCTGA GGCGACATGG AAGTCCTGGC GCCGCGTCGC GGTAGAAAAT GAAATGAAGT TCTTGTTCGA ATTTCACCCG GAACGAAACT GGCGCGATAC GGCCAAGGAC GTGGCTTCCA CAGGTGAGGA GATCATCCGC AATGCGGCGC CGTTCATCGA CGACGGCGCG TTCGCCATCC TGATCGATCA CGAAGAACTG GAGTTCCAGG AAGAGCGTAT GAAAGATGAG ATAGGCAAGG TCATCGACCG GTTCGGGCTC GATAAGCTCA TTTTCGAAGT GACCTCTCCA AAGGAAGGGC CGACTCGCTG GAAGGAAGAC CTGACACGTT ACTTCTCGAC GTTCGGAGGA AGCATCAATG TCGCAAACAT CATGCCGAGC CAAGCTATGT ATGTTGAAGT GCTAAGGCTC AACGCCGCCC GTTAA
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Protein sequence | MAEAFPVPTF ELKPRGLHQT WLKDVGFDEA PYYVERMGLI ELEDFLSVAG ERLDYVKVAT RQVIEHPEAW VRRKVELYQR FGVEPYLDHS YFHYAYQQGS VEKAIEAGRT RGFKAIEFMN TFGDVPEATW KSWRRVAVEN EMKFLFEFHP ERNWRDTAKD VASTGEEIIR NAAPFIDDGA FAILIDHEEL EFQEERMKDE IGKVIDRFGL DKLIFEVTSP KEGPTRWKED LTRYFSTFGG SINVANIMPS QAMYVEVLRL NAAR
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