| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9187 |
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| Symbol | traD |
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| ID | 7367726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 144625 |
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| End bp | 144870 |
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| Gene Length | 246 bp |
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| Protein Length | 81 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643644371 |
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| Product | conjugal transfer protein TraD |
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| Protein accession | YP_002542668 |
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| Protein GI | 222083265 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGGCGG GCCTGGCGAG GCTTGACCGG ATGGCAAAGT CGAAGACGTC AGACGCACGC
AAGAAGGACA CCCGCGAAAA AATCGAACTC GGCGGGCTGA TCGTGAAAGC CGGGCTGCGC
TACGAGAAGC GGGCGCTACT GCTCGGGCTG TTGATCGACG GCGGGCGCCG GCTCAAAGGC
GACGAAGACG AGCGGTCACG TTTGACCGCC ATCGGCGTGG AGGCGTTTGG CCATGACGGT
GAATAG
|
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| Protein sequence | MKAGLARLDR MAKSKTSDAR KKDTREKIEL GGLIVKAGLR YEKRALLLGL LIDGGRRLKG
DEDERSRLTA IGVEAFGHDG E
|
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| |