| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9165 |
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| Symbol | parB |
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| ID | 7367712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | + |
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| Start bp | 132159 |
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| End bp | 133997 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643644357 |
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| Product | plasmid partitioning protein |
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| Protein accession | YP_002542654 |
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| Protein GI | 222083251 |
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| COG category | [K] Transcription |
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| COG ID | [COG1475] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGAAGACGG ATAAGAGCTG GCATTGGGCC GGCTCGGCAA TCCCGGAAGG AGCCAATCTC
ATGCAGATCC TCAAACTCGA CCCACGCGCG CTCAAGGATA ATCCTGACGA CACGCGTCGC
TCGAAATCCT CACCACAATC CGACGCGCTG CTGCTTGCGA CGGTGAAGGC GGTTGGCATT
ATCCAGCCAC CTGTGATCTC CCCGGAAGTC GATGGCGGTA ACGGCTACAT CATCCAGGCC
GGCCACCGCC GTGTGAGGCA GGCAATCGCT GCGGGACTGG AGGAAATCAC CGTCCTCGTC
GTCGAAGCGG CGAACGACAA TGGCGCCATG CGTTCGATGG TGGAGAATAT AGCGCGTGAA
CCGCTCAATC CCGTTGACCA ATGGCGCGGC ATCGAACGCC TCGTCGCTCT CGGCTGGACC
GAGGAAGCGA TCGGCGTGGC GCTGGCACTG CCGGTGCGCC AGATCAGGAA GCTGCGGCTT
CTGGCCAATG TGCTGCCGGC CATACTCGAT CACATGGCAC TGGGCGACAT GCCGAACGAG
CAGCAACTCC GGACGATCGC CGCCGCCTCG CTCGGCGAGC AGAAAGAAGT CTGGAAGGCG
CACAAGCCGA AGAAGTCCGA GCGTGCCGAC TGGTACACTA TCTCTCGTGC ACTCTCCAAG
ACCCGCATGT TCGCCAAGGA TGCGAGCTTC GGCGATGATC TCGCGAGCGC CTATGGCATC
GAATGGGTCG AGGACCTGTT CGCGCCCGCC GATCAGGACA GTCGCTACAC GAACAACGTC
GAAGCTTTCC TTGGCGCGCA GCAGGAATGG ATGACTAACA ACCTTCCCAA GAAGGGCGCC
ATCATCGAGG TCAACAATTG GGGTCAGCCG GAACTGCCGA AGAAGGCGGA GCGCGTCTAC
GGCAAGCCGT CGAAGTCCGA TCACGTCGGC ATGTATCTCG ATCGTGACGG CAAGGTTCAG
TCGATCGCCT ACCGGATGCC CGAGGACAAA AAGAAGGTGA AAGGTGGCGC GGCCACGACG
GGCGCCGCCG AGAACCTCGA CAATGACGCG ATCGTCGATG CGCCGAAGCC TCGCCCGGTC
GTCACCCAGA AGGGTCAGGA CATGATCGGC GACTTCCGCA CCGACGCCCT CCACGAGGCG
CTCGGCCGTG CACCGATCGA GGACGACACG CTGATGGCGT TGCTCGTCCT CGCCTTCGCA
GGCCTCAATG TCCGCGTCGA CTCCGGTGCC AACGAGACCG TGTTCGGATC GAAGCGCTTC
AAGCGTCACG CCGCCCGCCT CATCGGCGAA GACGGCAAGC TTGCTTTCGA TCAGGAAACG
CTGCGCGTGG CCGCACGCTC TATGCTGATC GACGTGCTGT CGTGCCGGCG GGGGATGTCG
AACAGCGGGG TTGTTTCGCG GATCGCGGGT GACGCCATCG GCGCCGACAG CTTCTTAGCA
AACATGGGCT CGGAAGATTT CCTTTTGTGC TTGTCGCGTC AGGCGATGGA GGCGGCGGCC
AAAGAGGCGA ATGTGCTGCC ACGCCAGAAG GTCCGGGAAA CGCGCTTCGC GCTGATCGAC
CGTTTCAAGG AGGGTCACTT CGTGCACGCC TCGGCGCTGT TTGCGCCGGA TCCGAGCGAG
ATCGAAGATC TGATCAAGCA TGCCGAATAC CTCGACACCG ATGCAAACAC CCCGGAGGAT
GACGCTACCG ATGGCACCGC CGTCGATCGA AACCCTGCGA GCGAGGATGG CGGTCTCGAT
CCGTCCGAGG GCGAAGATGA TCTTCCGGAA ACGTTTGATG GTGACGCCGG CGAGGCCGAT
CCCGACGAGC AGGACGCCTA CGGGATCGCG GCGGAATAG
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| Protein sequence | MKTDKSWHWA GSAIPEGANL MQILKLDPRA LKDNPDDTRR SKSSPQSDAL LLATVKAVGI
IQPPVISPEV DGGNGYIIQA GHRRVRQAIA AGLEEITVLV VEAANDNGAM RSMVENIARE
PLNPVDQWRG IERLVALGWT EEAIGVALAL PVRQIRKLRL LANVLPAILD HMALGDMPNE
QQLRTIAAAS LGEQKEVWKA HKPKKSERAD WYTISRALSK TRMFAKDASF GDDLASAYGI
EWVEDLFAPA DQDSRYTNNV EAFLGAQQEW MTNNLPKKGA IIEVNNWGQP ELPKKAERVY
GKPSKSDHVG MYLDRDGKVQ SIAYRMPEDK KKVKGGAATT GAAENLDNDA IVDAPKPRPV
VTQKGQDMIG DFRTDALHEA LGRAPIEDDT LMALLVLAFA GLNVRVDSGA NETVFGSKRF
KRHAARLIGE DGKLAFDQET LRVAARSMLI DVLSCRRGMS NSGVVSRIAG DAIGADSFLA
NMGSEDFLLC LSRQAMEAAA KEANVLPRQK VRETRFALID RFKEGHFVHA SALFAPDPSE
IEDLIKHAEY LDTDANTPED DATDGTAVDR NPASEDGGLD PSEGEDDLPE TFDGDAGEAD
PDEQDAYGIA AE
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