| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9162 |
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| Symbol | |
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| ID | 7367710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | + |
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| Start bp | 125793 |
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| End bp | 130886 |
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| Gene Length | 5094 bp |
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| Protein Length | 1697 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643644355 |
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| Product | helicase SNF2 family |
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| Protein accession | YP_002542652 |
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| Protein GI | 222083249 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG4646] DNA methylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACG ATCCCTTTAC GCTCGATATG TTCGGCAATA CTGCACTCTC GTCTGCCCTC
GGCCTCGGTG TGACCGCTTT CGGCAGTATT GCCTCCGAAG CTGCCAATGA CGACAATCCC
GAACCCACAC CGCCGGCACC CGCCTCGGCC ATGCGGCCCG TTGGCGTTCA GGCCCCTATT
GCACGCAAAC AGGGCGACCG TGAAAACTTC TATTTCGAGG ATGGTGAGGA TCGCGGACTG
GCCGCCTCCT GGAAAGAGCG TGCTCGGTTG AACATCGCTG CCATTCTTTC CGCCGACCAA
CTCGAAAAGC TCGCTATCCC GACGACACGC GAGCAGCAGA GGCGTCTGAT CCGGTTCACC
GGCTTCGGTG CTGGCGAACT CGCCAACGGG ATCTTCCGCC GCCCAGGTGA GGTGGATTTT
AGGGATGGCT GGGACGATCT CGGTTCATCG CTCGAGACCG CCGTATCCGA GAGCGACTAT
TCCAGCCTCT CGCGCTGCAC CCAGTATGCT CACTTCACGC CGGAGTTCAT TATCCGGGCG
ATCTGGTCGG GATTGCTACG GATGGGTTGG CGCGGCGGCC GGGTGCTGGA ACCGGGCATC
GGCACGGGCC TGTTTCCGGC ATTGATGCCT GAAGAATACC GTGACACTTC CTATGTCACA
GGTATCGAGC TTGATCCTGT GACGGCGCGG ATTGCTCGGC TTCTGCAGCC GAAGTCACGG
ATCATCACCG GCGATTTCGC CCGCACCGAC CTGTCGGCGA TCTATGATCT TGCGGTCGGC
AACCCACCCT TTTCCGATCG TTCAGTACGT TCGGATCGCC AGTATCGCGC GCTCGGACTG
CGCCTCCATG ACTATTTCAT TGCCCGGTCC ATCGACCTGC TGAAGCCCGG TGCGTTGGCT
GCCTTCGTCA CATCACATGG CACGATGGAC AAGGCCGACA CGACAGCTCG CGAACATATC
GCCAAATCCG CCGACCTGAT CGCGGCAATC CGTCTGCCCG AAGGCAGTTT TCGGCGGGAT
GCCGGCACGG ACGTCGTGGT CGACATCCTG TTCTTCCGCA AGCGCAAGGC CGGTGAGCCG
GAGGGCGATC AGGCATGGCT TGACGTGGAC GAGGTCCGCC CCGCCACTGA TGATGAGGGC
GCAATCCGGG TCAATCGCTG GTTCGCCCGG AACCCCGACT TCGTTCTCGG CAGCCACGCG
CTGACCTCCG GTCCCTTCGG CGAGACCTAT ACATGCCGTC CGCGGGCCGG TGTCGATCTC
GAGACCGAGC TGAACGCCGC GATCTCCCTT CTTCCGGAAG ATCTTTATGA CGGCGACCCG
ACCGTAATCG ACATCGATCT GGAGGACGAG CTTGGCGTTA TCGTCGACCT GCGTTCGACA
GGATCGAAGG TTCGCGAAGG CAGCTTCTTC ATCGATAAAG CCCGTGGGCT GATGCAGATG
ATCGATGGTG CCGCCGTGGC GATCACCGTG CGGAGGGGCC GCTCAGCCGA CGGTGTGCCG
GAAAAACATG TGCGGATCAT AGCCAAGCTG ATCCCGGTTC GCGACGCCGT CCGCGAAGTG
CTGAAGGCAC AGGAACAGGG CCGCCCGTGG CGTGATCTCC AAGTGCGGCT GCGCATCGCA
TGGTCGTCGT TCGTGCGCGA CTTCGGTCCG ATCAACCATA AGACGGTCTC GATCTCGGAA
GACGCGGAGA CTGGGGAGGT CAAGGAAACG CATCGCCGGC CGAACCTTCA ACCCTTTCTT
GACGACCCGG ATTGCTGGCT TGTGGCTTCC ATCGAGGATT ACGATCTCGA AACCGATACT
GCTCGTCCCG GCCCGATCTT TTCAGAACGG ATGATCTCGC CACCAGCCCC ACCGGTCATC
ACAAGTCCAG CCGATGCGCT GGCTGTCGTC CTCAACGAAC GCGGTCGCGT CGATGTCGAC
CACATTGCCG AACTGCTGCA TCGCGATCCG GATGTGGTGA TTGCCGACCT GGGCGATGCC
ATCTTCCGGA ACCCGGCGGA TGGCGCCTGG CAGACGTCGG ATGCTTATCT CTCCGGACCG
GTGCGCACGA AACTTACCGC GGCGATCGCA GCCGCCGACC TCGATCCGGC GTTCAAACGG
AATGTCAGCG CGTTGCAAGA GGTGCAGCCC GCCGATCTTC GGCCGTCCGA TATCACCGCC
CGCCTCGGTG CGCCATGGAT CCCGGCCTCC GATGTGGTCG CCTTCGTCAG GGAGACGATG
GGCGCCGAGA TCAAAATCCA CCACATGCCG GAAATCGGGT CGTGGACGGT GGAAGCCCGC
CAGCTCGGGT ATATCGCGAC TGGCACGTCG GAATGGGGCA CGGACCGCCG CCATGCCGGC
GAACTACTCG CCGACGCCTT GAACTCCCGT GTCCCTCAGA TCTTCGACAC CTTCAAGGAT
GCCGATAGCG AGCGCCGGGT GCTTAACGTG GTCGACACGG AAGCGGCCCG TGACAAGTTG
CAGAAGATCA AGACCGCCTT TCAGACCTGG ATCTGGAGCG ACCCGGATCG TACAGACCGG
CTGGCGCGTG TCTACAACGA CCGTTTCAAC AATATCGCGC CGCGCAAGTT TGACGGCAGC
CATCTTCAAC TTCCGGGCGC CTCAGGCGCC TTTACTTTGT ATGGCCACCA GAAGCGCGGC
ATCTGGCGGA TCATCGCCGA TGGCTCGACC TATCTCGCCC ATGCCGTCGG CGCCGGTAAG
ACCATGACCA TGGCAGCCGC CATCATGGAA CAGCGCCGGC TCGGGCTGAT CGCCAAAGCG
ATGCTGGTCG TGCCCGGTCA TTGCCTGGCG CAGGCTGCGC GCGAGTTTCT GGCGCTTTAT
CCGTCGGCCA ACATCCTCGT CGCCGACGAG ACAAATTTTA CCAAAGACAA GCGCGCCCGT
TTCCTCAGCC GCGCAGCAAC CGCTGTCTGG GATGCGATCA TCATCACGCA TTCCGCCTTC
AGATTCATCG GCGTGCCGTC CGCTTTCGAA CAACAGATGA TCCAGGATGA ATTGCAGCTC
TATGAGGATC TTCTGACGAA GGTGGAGAGT GATGACCGTG TGTCCCGCAA ACGCTTGGAG
CGATTGAAGG AGGGCTTGGC TGAGCGGCTC GAAGCCCTTT CCACCCGCAA GGACGACCTC
CTGACCATTT CCGAGATCGG CGTCGACCAG ATTGTCATCG ACGAGGCGCA GGAGTTTCGC
AAGCTCTCCT TCGCCACCAA CATGTCCACA CTGAAAGGCA TCGATCCGAA CGGATCGCAG
AAGGCCTGGG ACCTTTACGT CAAATCGCGC TTCATCGAGT CAAAGAATCC CGGCCGCGCG
CTCGTGCTGG CCTCCGGCAC GCCGATTACC AATACGCTCG GCGAGATGTT CTCGATCCAG
CGGCTGCTTG GCCACGAGGC CCTGCACGAA CGCGGGCTCC ACGAGTTCGA CGCCTGGGCC
TCGAACTTTG GTGACGAGAA GACGGAACTC GAGCTTCAAC CCTCGGGCAA ATACAAACCG
GTCAGCCGCT TCTCGTCTTT CGTCAACGTG CCGGAACTGA TCGCCATGTT CCGCGCCTTT
GCCGACGTGG TGATGCCGGA GGATCTCAAG GCATATGTGA AAGTTCCCGA TATCGCCACC
GGCAAGCGGC AGATCCTGAC CGCGGCTCCG AGCCCGGCCT TCAAGACGTA TCAGCGGATC
CTCGAAGCCC GGATCAAGGC GATCGAGCAG CGCGAGGGAC CGGCGCAGCC CGGTGACGAC
ATTCTGCTTT CCGTCATCAC CGACGGCCGT CATGCGGCAA TCGACCTGCG GCTCGTGATG
CCGGTCATGG AGGACGAGCC GGACAACAAG CTCAACCTTC TGATCCGCAA CGCCTACCGG
ATATGGCAGG AGACGTCGCA TAGCACTTAT ATACGCCCGG ACGGCAAGCC ATACGATCTG
CCGGGCGCCG CCCAGATGAT CTTTTCCGAC CTCGGCACGA TCAATGTCGA GAAATCGCGG
GGCTTCTCGG CTTATCGCTG GATCCGCGAC GAGCTCATTC GGCTTGGCGT GCCGGCCTCC
GAAATCGCCT TCATGCAGGA GTACAAGAAA ACCGAAGCCA AGCAGCGCCT GTTTGGCGAC
GTCCGCGCCG GCAAGGTTCG CTTTCTAATC GGCTCGTCGG AGACGATGGG CACCGGCGTT
AATGCGCAGC TCCGCCTGAA GGCGCTTCAC CATCTCGATG TGCCGTGGCT GCCGTCACAG
ATCGAGCAGC GGGAGGGCCG CATCGTCCGT CAGGGCAACC AGCATAATGA GGTCGACATC
TTCGCCTATG CCACGCAGGG GTCTCTCGAC GCAACGATGT GGCAGAACAA CGAGCGCAAG
GCCCGGTTCA TCGCGGCTGC GCTCAGCGGT GACACATCGA TCCGCAGGCT CGAAGACCTC
AACGAAGGCG CCGCCAACCA GTTCGCGATG GCCAAGGCCA TCGCCTCCGG CGACGAGCGC
CTGATGCAGA AAGCAGGCCT GGAGGCCGAT ATCGCCAGGC TCGAACGGCT GCGGGCCGCC
CATGAGGACG ACCAGTATGC CGTCCGCCGG CAGATCCGCG ACGCCGATCG CGAGATCGAA
ACGGCCATCC GGCGGATCGG TGAGATCGGC CAGGATATCG AACGTCTGAT GCCGACGTCG
GGCGAAAGCT TCGCCATGAC CGTGACGGGA AAGCCATACA CCGAGCGCAA GGAGGCTGGA
CGAGCGCTGA TGAAGGAAAT CCTCACTCTG GTTCAGCTAC AGCAACAGGG CGAGGTCCAC
ATCGCCAGCA TCGGCGGCTT CGACCTCGTC TATGAGGGCG AGAAGTTCGG ACGCGGCGAC
AATTACCATT ACCAGACGCT GCTGCAGCGC ATCGGCGCGA CCCAAGAGAT CGAACTTCCT
GTGACTGTCA CCCCGCTCGG CGCCGTCTCT CGCCTCGAAC ATGCGCTCGA CGGGTTTGTG
GCCGAGCGGG AGCGTTATCG TCAGAGGCTT GAAGATTACC GCCGCGGGCT TGCATCCTAT
CAATCGCGGC AGGGTGGTGA ATTCGCCTTT GCCGACGAGC TGGCGGAAAA GCGCCGGTCA
CTGCGTGAGG TCGAAGAGGC TTTGGCGAAG TCCATTACTG ATGAAGCAGA GTAG
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| Protein sequence | MSNDPFTLDM FGNTALSSAL GLGVTAFGSI ASEAANDDNP EPTPPAPASA MRPVGVQAPI
ARKQGDRENF YFEDGEDRGL AASWKERARL NIAAILSADQ LEKLAIPTTR EQQRRLIRFT
GFGAGELANG IFRRPGEVDF RDGWDDLGSS LETAVSESDY SSLSRCTQYA HFTPEFIIRA
IWSGLLRMGW RGGRVLEPGI GTGLFPALMP EEYRDTSYVT GIELDPVTAR IARLLQPKSR
IITGDFARTD LSAIYDLAVG NPPFSDRSVR SDRQYRALGL RLHDYFIARS IDLLKPGALA
AFVTSHGTMD KADTTAREHI AKSADLIAAI RLPEGSFRRD AGTDVVVDIL FFRKRKAGEP
EGDQAWLDVD EVRPATDDEG AIRVNRWFAR NPDFVLGSHA LTSGPFGETY TCRPRAGVDL
ETELNAAISL LPEDLYDGDP TVIDIDLEDE LGVIVDLRST GSKVREGSFF IDKARGLMQM
IDGAAVAITV RRGRSADGVP EKHVRIIAKL IPVRDAVREV LKAQEQGRPW RDLQVRLRIA
WSSFVRDFGP INHKTVSISE DAETGEVKET HRRPNLQPFL DDPDCWLVAS IEDYDLETDT
ARPGPIFSER MISPPAPPVI TSPADALAVV LNERGRVDVD HIAELLHRDP DVVIADLGDA
IFRNPADGAW QTSDAYLSGP VRTKLTAAIA AADLDPAFKR NVSALQEVQP ADLRPSDITA
RLGAPWIPAS DVVAFVRETM GAEIKIHHMP EIGSWTVEAR QLGYIATGTS EWGTDRRHAG
ELLADALNSR VPQIFDTFKD ADSERRVLNV VDTEAARDKL QKIKTAFQTW IWSDPDRTDR
LARVYNDRFN NIAPRKFDGS HLQLPGASGA FTLYGHQKRG IWRIIADGST YLAHAVGAGK
TMTMAAAIME QRRLGLIAKA MLVVPGHCLA QAAREFLALY PSANILVADE TNFTKDKRAR
FLSRAATAVW DAIIITHSAF RFIGVPSAFE QQMIQDELQL YEDLLTKVES DDRVSRKRLE
RLKEGLAERL EALSTRKDDL LTISEIGVDQ IVIDEAQEFR KLSFATNMST LKGIDPNGSQ
KAWDLYVKSR FIESKNPGRA LVLASGTPIT NTLGEMFSIQ RLLGHEALHE RGLHEFDAWA
SNFGDEKTEL ELQPSGKYKP VSRFSSFVNV PELIAMFRAF ADVVMPEDLK AYVKVPDIAT
GKRQILTAAP SPAFKTYQRI LEARIKAIEQ REGPAQPGDD ILLSVITDGR HAAIDLRLVM
PVMEDEPDNK LNLLIRNAYR IWQETSHSTY IRPDGKPYDL PGAAQMIFSD LGTINVEKSR
GFSAYRWIRD ELIRLGVPAS EIAFMQEYKK TEAKQRLFGD VRAGKVRFLI GSSETMGTGV
NAQLRLKALH HLDVPWLPSQ IEQREGRIVR QGNQHNEVDI FAYATQGSLD ATMWQNNERK
ARFIAAALSG DTSIRRLEDL NEGAANQFAM AKAIASGDER LMQKAGLEAD IARLERLRAA
HEDDQYAVRR QIRDADREIE TAIRRIGEIG QDIERLMPTS GESFAMTVTG KPYTERKEAG
RALMKEILTL VQLQQQGEVH IASIGGFDLV YEGEKFGRGD NYHYQTLLQR IGATQEIELP
VTVTPLGAVS RLEHALDGFV AERERYRQRL EDYRRGLASY QSRQGGEFAF ADELAEKRRS
LREVEEALAK SITDEAE
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