| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9160 |
|---|
| Symbol | |
|---|
| ID | 7367708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011984 |
|---|
| Strand | + |
|---|
| Start bp | 124737 |
|---|
| End bp | 125276 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643644353 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002542650 |
|---|
| Protein GI | 222083247 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGATC GACACGCGCA ACGCCCCAAC CGTTGGGAGG GCAATGATGG TGCACTCTAC
TGCGGCGAAT GGTTCGAGAT CGACCCGTCG TCTCATGACT ATATGTTCGA GATTCTGCCG
CCGCTCTGGA CGCGCGGCGA GATGTTCGCC ATGCGCGAAT TCCTCACCGA CAGCATCACC
AGCGTTTTCT ACACGCTGAA GATCGACGAC CGCATGCGGC ATTTCCACGG TTATTGCGAT
CTCGCCGACA GCGGTTCGTC TGAGCGGATG CGCGATGCGA TTGTCGAGCG CGAGACCCGG
CCCGTGCGGG CGATGACGCA CGAGGAACGC CTGGACCACA TCTGGTCGAG CACGAACGAC
GAGTATCGCG GCTATGCCGG TGAGCGTTGG TCAGACCGCG ACCGCGGCAA GCGCACCGTG
TTGTTCTACG GCGGACGCCA GGGCACGGTC CTGAAGCTGC TCGAGGATCT CACCGAGGAC
GAGATCGCTG CCAAGCTTCC GGTGCATTTG CGCTATCTGC CTGACGCGAT CGCGGCGTGA
|
|---|
| Protein sequence | MFDRHAQRPN RWEGNDGALY CGEWFEIDPS SHDYMFEILP PLWTRGEMFA MREFLTDSIT
SVFYTLKIDD RMRHFHGYCD LADSGSSERM RDAIVERETR PVRAMTHEER LDHIWSSTND
EYRGYAGERW SDRDRGKRTV LFYGGRQGTV LKLLEDLTED EIAAKLPVHL RYLPDAIAA
|
|---|
| |