| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9131 |
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| Symbol | |
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| ID | 7367685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | + |
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| Start bp | 99284 |
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| End bp | 100354 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643644332 |
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| Product | transcriptional regulator LacI family |
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| Protein accession | YP_002542629 |
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| Protein GI | 222083226 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.897881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAG GCGAAGGCTC CACGAAAATC ACCATCAAAG AGGTCGCGGA AGCCGCCGGC
GTTTCTCGCT CCAGCGTTTC GAACTACCTG AACGAGCGCT TTGCAAATAT GGGGCTTGAG
ACGCGGGAGC GCATCAACCA GGCGATCGAG AGCCTCGGCT ATCGGCCCAA CAACGCTGCA
CGCCAACTGA AGACGGGCAA GGTACCGATG GTGGGATTGC TGGTTCCCAC CGTCATCAAC
CCGTTCTTCG GTGAACTGGC ACTGGCGGTC GAACAGGCTG CGGGCCGGCA CAACTATCGT
GTCCTGCTGT GCAATACGAT GCGCGACGCT GAGCGTGAGT ACGAATTCGA GGAGGAGATG
CTCAGCTTTG GCATTCGCGG CGTCATCACC GTCTCGCCGA TCGTCGGCCG CCGAAAGTCG
GCCCCCGCGG ATCTGGCGGT GGTGGCAATA GACGCCCGGC GCGGGGATCT CGGCTCGGCA
AATGTTGACC TCGTGAATCT AGACAATCAG GCTGCAACGA GCATAGCGGT CGACCATCTC
GTGAGTTTGG GACACAGGCA TATCGCCTAC GTGTCAGACT CGTCGTTCAC GTTCGCTCGC
GCATCACGGG CTGCAGGGTT CGAGGCCGCC GTCGCTGGAC ACGGCCTTTC CGATTGCCCT
GTCGTCGTCC AGTCCTTTGT CGATGGCATT GCGAGCTATT CCGACGTTGA GCTCTTTGAG
ATTGGGCGCG GCAGCGTGGC ACAATTGCTG TCATCTAATC CGCGTCCAAC GGCCATCATC
GCCCTTAACG ACATGATAGC GGTCGGCATA TTGTCTGCTC TCAGGCAGCA CGGCGTCGCT
GTTCCCGGCG AGATGTCGCT CGTGGGGATT GACGACATCG TGCTGTCGCA GCTGACCACA
CCTGGCCTTT CCACTATTCG CCAACCTGTG ACGCAAATGG CAGAGGCGGC CGTGGAATTG
CTGATCGCGC GGCTGCGTTC TCCGACCCGG TCCTCGACCG AAACAGTGTT CCAGCCGGAA
CTCGTGAGAC GCGAATCGAC AGAAAAGCCA TTTTCGCATG AACGAATATA A
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| Protein sequence | MTTGEGSTKI TIKEVAEAAG VSRSSVSNYL NERFANMGLE TRERINQAIE SLGYRPNNAA
RQLKTGKVPM VGLLVPTVIN PFFGELALAV EQAAGRHNYR VLLCNTMRDA EREYEFEEEM
LSFGIRGVIT VSPIVGRRKS APADLAVVAI DARRGDLGSA NVDLVNLDNQ AATSIAVDHL
VSLGHRHIAY VSDSSFTFAR ASRAAGFEAA VAGHGLSDCP VVVQSFVDGI ASYSDVELFE
IGRGSVAQLL SSNPRPTAII ALNDMIAVGI LSALRQHGVA VPGEMSLVGI DDIVLSQLTT
PGLSTIRQPV TQMAEAAVEL LIARLRSPTR SSTETVFQPE LVRRESTEKP FSHERI
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