Gene Avi_9121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9121 
Symbol 
ID7367675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011984 
Strand
Start bp85498 
End bp86796 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content59% 
IMG OID643644322 
ProductMFS permease 
Protein accessionYP_002542619 
Protein GI222083216 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00893] d-galactonate transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGGCG AATTGGAGAC GCGCGTATTG CGCAAAATCA CGTGGCGCAT TGTGCCATTC 
ATCATGGTCC TGTATCTCAT TGCATTCATC GATCGCGTGA ACATCGGTTT CGCGTCGCTG
ACGATGAACC AAGACCTTGG GTTCTCGTCC ACGGTCTTCG GTTTCGGCGC TGGCATCTTT
TTTCTCGGTT ACTTCCTGTT TGAAGTGCCG TCCAATCTCA TTCTGAACAA AGTCGGTGCG
CGTATCTGGA TCGCTCGGGT AATGATCACC TGGGGCATCG TATCAGGCTG TATGGCGCTG
GTTCAGGGAT CGACGAGCTT CTACATTCTA CGCTTCCTGC TGGGTGTCGC CGAAGCTGGC
TTCTTTCCCG GCATCATCCT CTATCTGAGC TACTGGTTCC CGGCGCGGCG TCGCGCCGCC
GTTACCGCCA TGTTCATGGC TGCCGCGCCT CTCGCGACAG CTATCGGATC GCCGATTTCC
GGCGCGCTCC TCGAGATGCA CGGCCTCTGG GGCCTGGCCG GATGGCAGTG GATGTTCATT
ATCGAAGCCA TTCCTGCAGT TATCCTCGGC GTCGTCGTCC TGTTCTATCT GACGGACCGC
CCGGAAAAGG CAAACTGGCT GACCGACGAA GAGCGTAACT GGCTCGTCAA GACGATGGAG
CAGGAGCAGG CCGGAAAGCC AAAGGCAAGC CACAGCATCT GGGCCGGTCT CGCCGATGTT
CGAGTGCTCG CCTTATCGCT GGTTTACTTT GGTACTTCTG CGGGCCTCTA TACACTCGGC
ATCTGGGCAC CGCAGATTAT CAAGGGCTTC GGTCTGGCCT CCTTCCATGT CGGCCTGATC
AATGCCATTC CCGCAATTTT TGCCGTTGTC GGGATGATCC TGTGGGCACG CCATTCCGAC
AAGACAGGTG AGCGCACCTG GCATGTTGTC GGCGCTTGCC TGCTCGCTGC GGCAGGACTT
GCCTTCGCCA CGGGCGCGAT GACGGTCTTT ACGGTCCTCG TTGCCCTGAC GCTGGTCAAT
ATCGGCATCA GCGCCTCAAA GCCGCCGCTT TGGAGCATGC CGACGCTCTT CCTATCCGGC
CCGGCCGCGG CCGCGGGCAT CGCGACGATC AATTCGATCG GCAATCTCGG CGGCTTCGTC
GGTCCGTCGA TGATTGGCTG GATCAAGGAC ACGACCGGTA GCTTCGCAGG CGGCCTGTAC
TTCGTCTCCG CCCTCCTGGT CATATCCGCG ATCGTCACCC TGATCCTCGC CAAGACCTCC
TCGGGCTCGC CGAAACACAA ACCGTCCATA CAACACTGA
 
Protein sequence
MTGELETRVL RKITWRIVPF IMVLYLIAFI DRVNIGFASL TMNQDLGFSS TVFGFGAGIF 
FLGYFLFEVP SNLILNKVGA RIWIARVMIT WGIVSGCMAL VQGSTSFYIL RFLLGVAEAG
FFPGIILYLS YWFPARRRAA VTAMFMAAAP LATAIGSPIS GALLEMHGLW GLAGWQWMFI
IEAIPAVILG VVVLFYLTDR PEKANWLTDE ERNWLVKTME QEQAGKPKAS HSIWAGLADV
RVLALSLVYF GTSAGLYTLG IWAPQIIKGF GLASFHVGLI NAIPAIFAVV GMILWARHSD
KTGERTWHVV GACLLAAAGL AFATGAMTVF TVLVALTLVN IGISASKPPL WSMPTLFLSG
PAAAAGIATI NSIGNLGGFV GPSMIGWIKD TTGSFAGGLY FVSALLVISA IVTLILAKTS
SGSPKHKPSI QH