Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9121 |
Symbol | |
ID | 7367675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011984 |
Strand | - |
Start bp | 85498 |
End bp | 86796 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643644322 |
Product | MFS permease |
Protein accession | YP_002542619 |
Protein GI | 222083216 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGGCG AATTGGAGAC GCGCGTATTG CGCAAAATCA CGTGGCGCAT TGTGCCATTC ATCATGGTCC TGTATCTCAT TGCATTCATC GATCGCGTGA ACATCGGTTT CGCGTCGCTG ACGATGAACC AAGACCTTGG GTTCTCGTCC ACGGTCTTCG GTTTCGGCGC TGGCATCTTT TTTCTCGGTT ACTTCCTGTT TGAAGTGCCG TCCAATCTCA TTCTGAACAA AGTCGGTGCG CGTATCTGGA TCGCTCGGGT AATGATCACC TGGGGCATCG TATCAGGCTG TATGGCGCTG GTTCAGGGAT CGACGAGCTT CTACATTCTA CGCTTCCTGC TGGGTGTCGC CGAAGCTGGC TTCTTTCCCG GCATCATCCT CTATCTGAGC TACTGGTTCC CGGCGCGGCG TCGCGCCGCC GTTACCGCCA TGTTCATGGC TGCCGCGCCT CTCGCGACAG CTATCGGATC GCCGATTTCC GGCGCGCTCC TCGAGATGCA CGGCCTCTGG GGCCTGGCCG GATGGCAGTG GATGTTCATT ATCGAAGCCA TTCCTGCAGT TATCCTCGGC GTCGTCGTCC TGTTCTATCT GACGGACCGC CCGGAAAAGG CAAACTGGCT GACCGACGAA GAGCGTAACT GGCTCGTCAA GACGATGGAG CAGGAGCAGG CCGGAAAGCC AAAGGCAAGC CACAGCATCT GGGCCGGTCT CGCCGATGTT CGAGTGCTCG CCTTATCGCT GGTTTACTTT GGTACTTCTG CGGGCCTCTA TACACTCGGC ATCTGGGCAC CGCAGATTAT CAAGGGCTTC GGTCTGGCCT CCTTCCATGT CGGCCTGATC AATGCCATTC CCGCAATTTT TGCCGTTGTC GGGATGATCC TGTGGGCACG CCATTCCGAC AAGACAGGTG AGCGCACCTG GCATGTTGTC GGCGCTTGCC TGCTCGCTGC GGCAGGACTT GCCTTCGCCA CGGGCGCGAT GACGGTCTTT ACGGTCCTCG TTGCCCTGAC GCTGGTCAAT ATCGGCATCA GCGCCTCAAA GCCGCCGCTT TGGAGCATGC CGACGCTCTT CCTATCCGGC CCGGCCGCGG CCGCGGGCAT CGCGACGATC AATTCGATCG GCAATCTCGG CGGCTTCGTC GGTCCGTCGA TGATTGGCTG GATCAAGGAC ACGACCGGTA GCTTCGCAGG CGGCCTGTAC TTCGTCTCCG CCCTCCTGGT CATATCCGCG ATCGTCACCC TGATCCTCGC CAAGACCTCC TCGGGCTCGC CGAAACACAA ACCGTCCATA CAACACTGA
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Protein sequence | MTGELETRVL RKITWRIVPF IMVLYLIAFI DRVNIGFASL TMNQDLGFSS TVFGFGAGIF FLGYFLFEVP SNLILNKVGA RIWIARVMIT WGIVSGCMAL VQGSTSFYIL RFLLGVAEAG FFPGIILYLS YWFPARRRAA VTAMFMAAAP LATAIGSPIS GALLEMHGLW GLAGWQWMFI IEAIPAVILG VVVLFYLTDR PEKANWLTDE ERNWLVKTME QEQAGKPKAS HSIWAGLADV RVLALSLVYF GTSAGLYTLG IWAPQIIKGF GLASFHVGLI NAIPAIFAVV GMILWARHSD KTGERTWHVV GACLLAAAGL AFATGAMTVF TVLVALTLVN IGISASKPPL WSMPTLFLSG PAAAAGIATI NSIGNLGGFV GPSMIGWIKD TTGSFAGGLY FVSALLVISA IVTLILAKTS SGSPKHKPSI QH
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