| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9077 |
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| Symbol | mcpA |
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| ID | 7367805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | + |
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| Start bp | 52940 |
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| End bp | 53986 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643644298 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002542595 |
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| Protein GI | 222083192 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTCAAGA TTTCTGCGTG TCTAATGGAA TATTTACATC GCGTAAATAT CTTTACCCAA
GAATTCGCAT CAGCATTAGC TGCTGCGAGC TTGCGGATGG TCCGGCCGAG CGACGGGGAG
CATTTTGGGG TAAATGGGAT GTTAGGATTT GGTGGCGCCG ACGCAAAGGC AGTCCTTGAG
GCCCTCAGCA AGTCTCAGGC CATTATCGAG TTTAAGCTCG ATGGTACGAT CATCACCGCA
AACGAGAATT TCTGTCGGGC GCTTGGATAT CAGCTGTCCG AAATCGTGGG CAAGCACCAC
AAGATCTTCG TCGATCCGAC CGAAGTCAAC AGCTCCGATT ACATCGATTT TTGGGCAAGG
CTGGGACGCG GCGAATTTGA CCGTCGCCAG TACAAGCGTA TCGGCAAAGG CGGCATGGAA
GTCTGGATCG AGGCTTCCTA CAATCCGGTG TCGAGGGGCG GCAGGCCCTA TAAGGTCGTC
AAATTCGCGA CAGATATCAC CGAACAAAAA CTTAAAGCCG CCGAAGATAG TAGAAAGCTC
GACGCGATCT CCAGGGCTCA GGCCGTCATC GAGTTCACGC CCGGCGGGGA CATCCTGACG
GCAAACGAGA ACTTCCTTCA GACCCTTGGC TATCAACTCT CTGAGGTTCA GGGCAAGCAT
CATTCCATGT TCTGCGAGCC GGGCTACACG AGGAGCGAGG ATTACCGCCG CTTCTGGGCA
AGGCTCGCCG GCGGCGAATT CGTTGCAGAT GAGTTCATGC GTCTCGGCAA GGGGGGCAAG
CGCGTCCACA TCCAGGCGTC CTACAACCCG ATCTTCGACA TGAATGGCAA AGTGTTCAAG
GTGGTCAAGT TTGCGACCGA CGTGTCTGAG CGTGTCAACA GCGTCGAGCA ACTGGCCAGC
GCACTCCAGG CTATGGCTGG CGGTGACCTG ACGCAGGAAC TCCGCTCACC CTTCATGCCC
GCCTTGGAAA GACTGCGCAG CGACTTCAAC GAAACGTCTT CGAAGCTCCG CACGACGCTG
CAAACTGTCC GACATCAGCG CCCATGA
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| Protein sequence | MLKISACLME YLHRVNIFTQ EFASALAAAS LRMVRPSDGE HFGVNGMLGF GGADAKAVLE
ALSKSQAIIE FKLDGTIITA NENFCRALGY QLSEIVGKHH KIFVDPTEVN SSDYIDFWAR
LGRGEFDRRQ YKRIGKGGME VWIEASYNPV SRGGRPYKVV KFATDITEQK LKAAEDSRKL
DAISRAQAVI EFTPGGDILT ANENFLQTLG YQLSEVQGKH HSMFCEPGYT RSEDYRRFWA
RLAGGEFVAD EFMRLGKGGK RVHIQASYNP IFDMNGKVFK VVKFATDVSE RVNSVEQLAS
ALQAMAGGDL TQELRSPFMP ALERLRSDFN ETSSKLRTTL QTVRHQRP
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