| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9075 |
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| Symbol | |
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| ID | 7367803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | + |
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| Start bp | 48919 |
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| End bp | 50595 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643644296 |
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| Product | hypothetical protein |
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| Protein accession | YP_002542593 |
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| Protein GI | 222083190 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.979947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCATC ATACATTCGC AGGCATGAAA GAAGCCCGCG AATTCCTCTC ATCCGAGATT
GGCTCGCTAT CGGTTCTATC TCGGGCTGAT CAAGAGAACG AGATGAAGTG GTTCATCGAA
GCGGCGAGGC CTTATCAAGG AATGGAAATC AACGTCGTTT CCGAGACTCT GACGACGCAT
AAATACGAGT CGGAAGTCCT CGCTCCGGCA TTCACGGCTA TCACCGGCAT CCGGGTCAAC
CATGAGCTCA CGAGCGAAGG CGACGTCGTG GACAAGCTCC AGACCCAGAT GCAGTCCGGT
GAAAGTTCCT ACGATGCGTA CGTAAACGAC TCGGATCTGA TCGGCACGCA CTGGCGCTAC
CAACAGGCCC GGTCACTTAC AAAGTTCATG CGCGACGAGG GCAGGGACGT CACCAATCCG
GACCTGGACC TGAACGACTA CATCGGCCTC AAGTTCACGT CGGCACCGGA CGGCGACCTG
TATCAGCTAC CCGACCAGCA GTTCGCGAAC CTCTACTGGT TCCGGTACGA CTGGTTCAAC
GACCAGAAGA ACAAGGCCGA CTTCAAGGCG AAATACGGCT ACGACCTCGG CGTTCCCGTC
AACTGGTCCG CCTATGAGGA CATCGCCGAG TTCTTCACCG GCCGCGAGAT CGACGGCAAG
AAGGTCTATG GCCACATGGA CTACGGCAAG AAGGACCCGT CGCTCGGCTG GCGCTTCACC
GATGCCTGGC TGTCGATGGC TGGCAATGGC GACAAGGGCC TGCCGAACGG TCTTCCGGTC
GACGAGTGGG GCATCAAGGT CAACGAGAAG TCCCAGCCGG TCGGCTCCTG CGTCGCCCGC
GGCGGCGACA CCAACGGCCC GGCTGCAGTC TATTCCATTC AGAAGTATCT GGACTGGATG
AAGGCCTACG CACCTCCAAG GGCAGGCAGC ATGAACTTTT CCGAGTCCGG TCCGGTTCCG
GCGCAAGGCG AGATTGCGCA GCAGATCTTC ATGTACACCG CCTTCACCGC GGATATGGTC
AAACCCGGCC TTCCGGTCGT GACAGGCGAC GGAACCCCGA AATGGCGCTT CGCTCCTTCG
CCGCATGGCG TCTACTGGAA GGACGGGATG AAGCTCGGCT ATCAAGACGT CGGCTCGTGG
ACGCTATTGA AATCCACGCC CGTGGACCGA GCTAAAGCGG CTTGGCTTTA CGCCCAATTC
GTCACTTCGA AAACTGTCGA CGTCAAGAAA AGCCATATGG GCCTGACCTT CATTCGCGAG
TCTACGATAC ACGACACGAG CTTTACGAAA AGGGCCTCCA AACTCGGCGG TCTCGTCGAG
TTCTACCGCT CGCCGGCCCG CGTCCAGTGG TCGCCCACCG GCACCAACGT TCCCGACTAT
CCGAAGCTAT CTGAGTTATG GTGGCAGGCT ATCGGCGACG CAGCAGCGGG GACGAAAACC
CCGCAGGAGG CATTGGATTC GCTATGCGCC AACCAGGAAC GTGTCCTCCA GCGCCTTGAG
CGTGCCGAAA TCCAGGGAGC CATCGGTCCG GTGCTGTCAG AACAGCGCGA TCTCCAGTAC
TGGCACCAGG TCGCCGTAGC GAACGGCCAC CTCGCGCCGC AGCCGAAAAT CCAGAACGAA
AAACAAAGCC CGGTCACCGT TGACTACGAC GCGCTCGTCG ACAGCTGGCG AAACTAG
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| Protein sequence | MPHHTFAGMK EAREFLSSEI GSLSVLSRAD QENEMKWFIE AARPYQGMEI NVVSETLTTH
KYESEVLAPA FTAITGIRVN HELTSEGDVV DKLQTQMQSG ESSYDAYVND SDLIGTHWRY
QQARSLTKFM RDEGRDVTNP DLDLNDYIGL KFTSAPDGDL YQLPDQQFAN LYWFRYDWFN
DQKNKADFKA KYGYDLGVPV NWSAYEDIAE FFTGREIDGK KVYGHMDYGK KDPSLGWRFT
DAWLSMAGNG DKGLPNGLPV DEWGIKVNEK SQPVGSCVAR GGDTNGPAAV YSIQKYLDWM
KAYAPPRAGS MNFSESGPVP AQGEIAQQIF MYTAFTADMV KPGLPVVTGD GTPKWRFAPS
PHGVYWKDGM KLGYQDVGSW TLLKSTPVDR AKAAWLYAQF VTSKTVDVKK SHMGLTFIRE
STIHDTSFTK RASKLGGLVE FYRSPARVQW SPTGTNVPDY PKLSELWWQA IGDAAAGTKT
PQEALDSLCA NQERVLQRLE RAEIQGAIGP VLSEQRDLQY WHQVAVANGH LAPQPKIQNE
KQSPVTVDYD ALVDSWRN
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