| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9068 |
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| Symbol | |
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| ID | 7367798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 45005 |
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| End bp | 45976 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643644291 |
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| Product | transcriptional regulator AraC family |
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| Protein accession | YP_002542588 |
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| Protein GI | 222083185 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGTCT TGAATTCTGT TGCGAACACG GTTCCGACAA GGTTTCGTTT CGATCTCCTA
ACCCACGATG ATAACGACAG GTTACAGTCA GACAGTTTGT GCCCGGTTGG ATTCACTTCT
CTTGGTCGAG AGCCGGTCCG TCTCAAGTTC GGCGGGACTA AAATTCGAGA TTTTTGTGTT
TGGAAAACGG AGTCCGCGAC AGGTTTCGAA GCCCGGCCGC GTGTTGTTTC GGATCTGGTG
ACTATCCGAT TCCCTATAAG CGGCGGCTTG GCGCGTAAGG ACGGTCGGGA AGAGGTCAAC
ATCGACCGAG GACAGGGCGT TATCATACCT TTTCGGGATA TGGAGTATGA GCGAACTTCC
CGGAGCGCCA GTATGATAAG CTGTACAATC GCATCCGTAA GCATATTCCA GAAAATGCAG
GCGCTGTACG GGGAGGAACG TAGCACGTTC GCATCCTTCG TACCCGTCGT CGACGTGAAC
ATACCTCAGA TCCGCATCTT CAGGACCGCG CTCCTCCGCT TGCACGACAA CCTCCAGCAG
CACGGAGACC ATAATCCGCT GTCTTTTCCG ATAGTCGAGG AACTGCTCGT CTTCCACCTG
CTGTCCTGCT GGCCAACAAC GGCGGCCGTG AGACCCACCG CCGACCAGGT AAACAACCGA
GTGCTTCGAA ACGCCCTCGA TTACATAGAA GCGAACCTAG CAAGTCCGAT AACCGTGTCC
GAGATCGCGT TCGCCGCAGG GGTCAGCGTT CGCAGTTTGC AGATCGCTTT CAGGGAATCG
AAAGGCATAA CTCCGGTTCA GTACATTATC GAATGTCGAC TTGACCGCGT CCACGATGCC
CTCAAGCGAG GCTTCGCTCC AGGCTACATA TCGCAGATCG CAAATGCCTG GGGTTTCCAG
CATCACGCGG ACTTTTCTCG AAGATACCGA AAGCGGTTTG GCGAAACTCC CAAACAAACA
CGGACGCGCT GA
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| Protein sequence | MPVLNSVANT VPTRFRFDLL THDDNDRLQS DSLCPVGFTS LGREPVRLKF GGTKIRDFCV
WKTESATGFE ARPRVVSDLV TIRFPISGGL ARKDGREEVN IDRGQGVIIP FRDMEYERTS
RSASMISCTI ASVSIFQKMQ ALYGEERSTF ASFVPVVDVN IPQIRIFRTA LLRLHDNLQQ
HGDHNPLSFP IVEELLVFHL LSCWPTTAAV RPTADQVNNR VLRNALDYIE ANLASPITVS
EIAFAAGVSV RSLQIAFRES KGITPVQYII ECRLDRVHDA LKRGFAPGYI SQIANAWGFQ
HHADFSRRYR KRFGETPKQT RTR
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