| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9065 |
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| Symbol | mcpC |
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| ID | 7367795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 42169 |
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| End bp | 43698 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643644288 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002542585 |
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| Protein GI | 222083182 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATGG CACGAACCAG CATTAAGACG GCGCTCCCAT CCTTGGTGAT ACTCGCGGGA
ATCGTCTTCC TAGCATTTTC GACATTCGCG GTGGGACAGA TCTCTGCCAT AAACTCCAAT
GTTGGCAGTA TAGCGACAAA CTGGCTGCCG AACGTGTCGT CAGCGAAGGA AATGAACGTC
GCGCTCGGTG ACCTTCGACT GGCTTACAGA AACTACATAA TGGCCCAGTC TGAGGACCAG
TTGCAGAAAG CCGACGGCGC TATTACGGCT GCGATCGCTG ACTTCCGGAA GCAGGCTGAC
TTATACAGGA GCCTACCGAT GACCTCTACG GACGAAGCGT TGATCGGTCG CGTGATAGAT
GTCTTCGACG GCTACGTGGT CACTGGATCA GGCATTACCG GATCCTTCAA ATCCCGAGGC
CTTTTAGCTT CCATCAACGC TGTCAGCACC GAGTTGGGAC CCGTCGGTGA CCGGATCGCC
GAAGACCTCG ACGCTCTCGT GGACTTCAAC ACCAAGGGCG CACAAGATGC TTATACTGCC
AGCCAGGCAT CATACAGCTG GACGGTGCAG ACGAGCTATA TCGCCATTGG CGTCTCGGTT
CTCATAATGG GAGTCATCGT CTACTTCGCT TACTTCTGTG TCGCCCGGCC GATCGAGATC
GTAAGGGATT CCATTGCGAA CCTCGCTGCG GGCCAGACCG ATCGCGCGAT ACCTTTCGCG
GGAAGAAAGG ACGAGATCGG TTCTATCGCC GAAGCCATCG AGACGTTCAG GAAGGGCGCC
ATTGAAAAGA AGCAGTTGGA GGAGACCGCA GCACGCCACC GCGCGCAGGC GGAAGCTGAG
CGAGACCGTA TGAAAGCGGA AACGGAAGCA GCTGCCAACG TACGCCTTGC TGAGGCGACT
TCCGGGATTG CCGACGGCCT GCGCCGTCTT GCTGACGGCG ACCTTTCGTT TCAGATCACC
GAACCTTTCG CCGCGGAATT CGAAACACTT CGCAGCGATT TGAATTCGGC GGTGATGCGT
CTCGGGAAAA CCGTCGAGTC GGTCGCTCGT ACCACGCACG CGCTGGATGG TGGTGCGCGT
GAGATTGCGC AGAGCGCTGA CGACCTCTCG AAGAGGACGG AGCAGCAGGC TGCCTCCCTC
GAAGAGACCG CTGCAGCACT CGACCAGATC ACCGCGAACC TGACAAACTC GTCCAAGCGC
GCCGAGGAAG CGCGGGAAGC CGCAGCGCAT GCGACGGTCA GTGCCAAGCA TTCCGCCACG
GTAGTCGCCA ACGCCGTGAA CGCCATGGGG CGCATCGAAG CATCTGCGAA CCAGATCGCG
AGTATCATCG GCGTGGTAGA TGAAATCGCG TTTCAAACGA ACCTTTTGGC GCTGAATGCG
GGGGTAGAGG CGGCGCGCGC GGGCGACGCC GGAAAAGGCT TTGCGGTCGT CGCGCAGGAA
GTCAGGGAAT TTGCACAGCG CTCGGCGCAG GCCGCGAAGG AGATAAAAGG GTGTTGTCAC
GTTAAGTTTC CCATCCCGAG AATGGGTTGA
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| Protein sequence | MTMARTSIKT ALPSLVILAG IVFLAFSTFA VGQISAINSN VGSIATNWLP NVSSAKEMNV
ALGDLRLAYR NYIMAQSEDQ LQKADGAITA AIADFRKQAD LYRSLPMTST DEALIGRVID
VFDGYVVTGS GITGSFKSRG LLASINAVST ELGPVGDRIA EDLDALVDFN TKGAQDAYTA
SQASYSWTVQ TSYIAIGVSV LIMGVIVYFA YFCVARPIEI VRDSIANLAA GQTDRAIPFA
GRKDEIGSIA EAIETFRKGA IEKKQLEETA ARHRAQAEAE RDRMKAETEA AANVRLAEAT
SGIADGLRRL ADGDLSFQIT EPFAAEFETL RSDLNSAVMR LGKTVESVAR TTHALDGGAR
EIAQSADDLS KRTEQQAASL EETAAALDQI TANLTNSSKR AEEAREAAAH ATVSAKHSAT
VVANAVNAMG RIEASANQIA SIIGVVDEIA FQTNLLALNA GVEAARAGDA GKGFAVVAQE
VREFAQRSAQ AAKEIKGCCH VKFPIPRMG
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