Gene Avi_9049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9049 
Symbol 
ID7367784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011984 
Strand
Start bp31975 
End bp32436 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content64% 
IMG OID643644278 
ProductTranscriptional regulator 
Protein accessionYP_002542575 
Protein GI222083172 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.578092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTCAA TCCAACCCGC GTCGGACTTG ACCGCCCATC TCGGCTACTG GCTACGCCAC 
GTCTCCAACC ACGTCTCGCA AGCCTTTGCC CGCAAGGTTG AGGCGCATGG TGTGACGGTG
GCGGAATGGG TGCTGATGCG CCATCTGCTG GAGGACGAAG CCCTTGCTCC GAGCCGTCTG
GCTGAGCGTA TGGGCATGAC ACGCGGCGCC ATCTCAAAGC TGGCCGACCG GCTGATCGCC
AAATCGATGC TGGTGCGCGT CGCCGATCCG GAGGACGGGC GGGCCCAGAC GCTTTCACTC
GCGTCCGCTG GCCGCGCCCT TGTGCCGAAA CTGGCGGCGC TGGCCGACCT CAACGATGCC
GAATTCTTCG ATCACCTGGC ACCGGATGAC CGCGCGGTTC TGCTCTGCAC CCTGCGGGAG
ATCGTAGAGA AACACGGTCT CAAATCCATG CCCGTCGATT GA
 
Protein sequence
MPSIQPASDL TAHLGYWLRH VSNHVSQAFA RKVEAHGVTV AEWVLMRHLL EDEALAPSRL 
AERMGMTRGA ISKLADRLIA KSMLVRVADP EDGRAQTLSL ASAGRALVPK LAALADLNDA
EFFDHLAPDD RAVLLCTLRE IVEKHGLKSM PVD