Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9049 |
Symbol | |
ID | 7367784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011984 |
Strand | + |
Start bp | 31975 |
End bp | 32436 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643644278 |
Product | Transcriptional regulator |
Protein accession | YP_002542575 |
Protein GI | 222083172 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.578092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTCAA TCCAACCCGC GTCGGACTTG ACCGCCCATC TCGGCTACTG GCTACGCCAC GTCTCCAACC ACGTCTCGCA AGCCTTTGCC CGCAAGGTTG AGGCGCATGG TGTGACGGTG GCGGAATGGG TGCTGATGCG CCATCTGCTG GAGGACGAAG CCCTTGCTCC GAGCCGTCTG GCTGAGCGTA TGGGCATGAC ACGCGGCGCC ATCTCAAAGC TGGCCGACCG GCTGATCGCC AAATCGATGC TGGTGCGCGT CGCCGATCCG GAGGACGGGC GGGCCCAGAC GCTTTCACTC GCGTCCGCTG GCCGCGCCCT TGTGCCGAAA CTGGCGGCGC TGGCCGACCT CAACGATGCC GAATTCTTCG ATCACCTGGC ACCGGATGAC CGCGCGGTTC TGCTCTGCAC CCTGCGGGAG ATCGTAGAGA AACACGGTCT CAAATCCATG CCCGTCGATT GA
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Protein sequence | MPSIQPASDL TAHLGYWLRH VSNHVSQAFA RKVEAHGVTV AEWVLMRHLL EDEALAPSRL AERMGMTRGA ISKLADRLIA KSMLVRVADP EDGRAQTLSL ASAGRALVPK LAALADLNDA EFFDHLAPDD RAVLLCTLRE IVEKHGLKSM PVD
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