Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9039 |
Symbol | |
ID | 7367778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011984 |
Strand | - |
Start bp | 25407 |
End bp | 26138 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643644272 |
Product | transposase |
Protein accession | YP_002542569 |
Protein GI | 222083166 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGATTTT GCGGCATGAC CCAAACCGTT CGTGATCCCC TTTATCGCCG CCACCGGTTC CCAGCTGAAG TGATTGCTCA TGCCGTCTGG CTTTATCTTC GCTTCCCGCT CAGCTTGCGC ATGATCGAAG ACTTACTGGC GGCGCGCGGG ATAACTGTCT CGCACCAGAC AGTCCGCCTT TGGGCCGAGA AATTCGGGCG GCGCTTTGCC AATGAAATCC GGCGGCGATC GGCCGGAAAG CTTGGCGACA AATGGTATCT CGATGAAGTC GTCATCTCCA TTGGCGGCAA GAAACATTGG CTCTGGCGCG CCGTCGATCA GGATGGTTTC GTCCTTGACG TCCTTGTCCA GAGCCGCCGC AATGCCAAGG CTGCAAAGCG TTTGATGCGA AAACTCCTGA AAGGACAAGG CCGTTCGCCT CGCGTGATGA TCACCGACAA GCTCCGGTCC TACGGTGCGG CGAAGCGGGA GATCATGCCC GCCGTCGAGC ATCGTTCACA TAAGGGACTG AACAATCGGG CAGAAAACTC TCATCAGCCG ATCCGAAGGC GGGAGCGGAT CATGAAGCGC TTCAAGTCGG CACGACACCT TCAGCGTTTC GTTTCCATCC ACGACCCGAT CGCCAACCTC TTCCAAATTC CCCGCCACGA CACTTCATCT CTCCATTATC GCGAGCTGCG AGTAGCCGCG ACGCAGATGT GGAGCGAGAT CGCTCATCTT CAGGTAGCCT GA
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Protein sequence | MRFCGMTQTV RDPLYRRHRF PAEVIAHAVW LYLRFPLSLR MIEDLLAARG ITVSHQTVRL WAEKFGRRFA NEIRRRSAGK LGDKWYLDEV VISIGGKKHW LWRAVDQDGF VLDVLVQSRR NAKAAKRLMR KLLKGQGRSP RVMITDKLRS YGAAKREIMP AVEHRSHKGL NNRAENSHQP IRRRERIMKR FKSARHLQRF VSIHDPIANL FQIPRHDTSS LHYRELRVAA TQMWSEIAHL QVA
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