| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9020 |
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| Symbol | |
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| ID | 7367767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 14326 |
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| End bp | 15093 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643644264 |
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| Product | integrase/recombinase |
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| Protein accession | YP_002542561 |
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| Protein GI | 222083158 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGAAGGA GCAATCAGGC ACGCTCCCGG CAGACGGACG TCTATTTGTT TCGGGTCGCT
CAGATGCTGG GAGACTTTGT GGCTCACGGC GCTGTGTTGC GTCGCTATGA TCGCCGGGGC
GATAAGCTCG CAGCCCATCA GGCTGAGCTG ATCGGTAAAT TCCAGGCCGC GTTACGTGCC
GAGGGTTGTG CAGTTTCGAC GGTGCGCACG TATGGGACGC TGGCCGGAGA GTTTCTTTCG
TTTGTGGACA CGCGCGGCCG ACTTACTGAA TGCGATGCCA GAACAGTCGA GGCGTTTGTT
GCCACCTTGT CCGGATACCA AGCAAAGACG GTCGAACAAA AGCTGTGCGC GGTCCGCTCT
TTTCTCAGAT ACGCGGAGCG CCAGGGGCAG GTCAATGCCG ACGTATTGAA GGCTGTCCCG
GCGGTGAAGT CCAGCAAGCA TGCCAGAGTT CCATCGGTGT GGGATCCCGC CGATGTGGCC
AGGATTTTGG ATGCCATCGA TCAAGGCAAT CCCAGCGGCA AAAGGGACTA CGCGATTATT
ACGTTGGTCA CGCGGCTCGG TCTGCGGAGC ATCGACGTCA AGCGTCTGGA ATTGGATGAT
TTCGACTGGC CGGGCAATCG GCTCTGGGTG AGGCAGACCA AGACCGGGCA CCGCATACAA
CTGCCGCTAT TGAAAGACGT TGGCTGGGCG ATAATCAACT ACATCCGTCA TGGCCGACCG
TCTACCGATT TGTCCGACAT CAGCGCCCAT GAGACAGAAC TGGCTTAA
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| Protein sequence | MRRSNQARSR QTDVYLFRVA QMLGDFVAHG AVLRRYDRRG DKLAAHQAEL IGKFQAALRA
EGCAVSTVRT YGTLAGEFLS FVDTRGRLTE CDARTVEAFV ATLSGYQAKT VEQKLCAVRS
FLRYAERQGQ VNADVLKAVP AVKSSKHARV PSVWDPADVA RILDAIDQGN PSGKRDYAII
TLVTRLGLRS IDVKRLELDD FDWPGNRLWV RQTKTGHRIQ LPLLKDVGWA IINYIRHGRP
STDLSDISAH ETELA
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