Gene Avi_9014 details

Gene Information

• Locus tag: Avi_9014
• ID: 7367763
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011984
• Strand: +
• Start bp: 11140
• End bp: 11832
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643644262
• Product: hypothetical protein
• Protein accession: YP_002542559
• Protein GI: 222083156
• COG category: [S] Function unknown
• COG ID: [COG1801] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.19539
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCCGATCA TTGCCACCGC GGCTTGGTCT ATCCCGAAAA AGGTGGCCGA CCGGTTTGCG 
CAGGGAGGAA GCAGCCTCAC CCGATATGCA TCGGTCTTCG ACGGCGTCGA GGTCAATTCG 
ACCTTCTACC GCCGGCACAA GACGTCGACA TTCGCAACGT GGGAACACTC CGTACCCGAC 
GCATTCCGGT TCGCAGTCAA AATTCCTAAG GAGATTACCC ACACTAGCGC GATGAGAGAC 
ATCGCCGAGC CGTTCGACAC TTTCCTCGAA GACATCGCGC CTCTTGGAGA GAAGCGTGGA 
CCACTGCTCT GTCAGCTGCC GCCATCGCTG ACCTTCGATG TTGAGGTGCT CCAAACAGCG 
TTCAAGACGA TGCGGGATGC CGATGATGGG CCGATCGTCA TCGAGGTACG GCACAAGAGC 
TGGGCATCGG CCGAAGCGCT GGATCTGCTG AAGACCTATA GGATCGACCG GGTTCTGGCC 
GATCCTGCGC CGGTATGGCC GGTGGAAGAT TTCGACACAC CGCCGAAATA CGTTCGCCTG 
CATGGCAAGC CAAAAATCTA CTACTCAAGC TATACCGACG ACGAAATCAA GTCGTTCTCA 
GCCCTGCTGG CGCCGGATAG CTGGTGTGTG TTCGACAATA CTGCCTCGGG TGCCGCGATC 
GAAAATGCGC TGAACATGGC TGAAATACGT TGA 

 

Protein sequence

MPIIATAAWS IPKKVADRFA QGGSSLTRYA SVFDGVEVNS TFYRRHKTST FATWEHSVPD 
AFRFAVKIPK EITHTSAMRD IAEPFDTFLE DIAPLGEKRG PLLCQLPPSL TFDVEVLQTA 
FKTMRDADDG PIVIEVRHKS WASAEALDLL KTYRIDRVLA DPAPVWPVED FDTPPKYVRL 
HGKPKIYYSS YTDDEIKSFS ALLAPDSWCV FDNTASGAAI ENALNMAEIR