| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9004 |
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| Symbol | |
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| ID | 7367756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 3839 |
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| End bp | 4780 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643644255 |
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| Product | DNA invertase |
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| Protein accession | YP_002542552 |
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| Protein GI | 222083149 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGCTA ACACGAACAA TCGGGCTTCC CGTCCACCAC AGGGCCGGCT GATCGGCTAT
GCACGCGTCT CTACGGACGA GCAGGCGACG GAAGCCCAGG AGATCGACCT GCGATCGGCC
GGGTGCGATG TGATCGTCCA GGAACACGGA TCCGGCGCCT CGCGTGCCCG CCCTACCCTT
TCCAAACTCG TTCGCGAGAT CGGCGCCGGC GACACGCTCG TTGTGGTACG GCTCGATCGC
CTTGCGCGTT CCGTCAGCCA TCTTCTCGAG GTCATTGAGG ATCTGACTGA GAGAGGAGCG
CATTTCCGAT CTCTGCACGA TCCCATCGAC ACATCGACGC CACAGGGAAT GTTTTCGCTG
CAGGTGCTCG GCGCTGTGGC GCAGCTCGAA CGCGCGTTGA TCTCCGAACG AACGAAGGCT
GGCATAAGAG CGGCGAAGTC CAAGGGGAAG TTGCCCGGCA ACCCCGGCAT CCGCGAGAAA
CGCCCTGATA TGCTGGCGAG GATGACCGCA GCGCAGAAAG CGGCTTACGG CGAGCGTGTC
CAGGCCTCCG CAAACCAATG GCTTCCGACC GTTCGGCGCA TGCGGCCGGA TCACACGTGG
GACGATATCG CCCGCATGCT CAAGCAGCGC GGCCTTGACT GGACGCCCGA ACGTCTTCGT
CGCGCGGTGA GGTGGCTGGT GGCGGAACGC ATGGCCGATC CGGCTTTGCT TCGCAAGTCC
CCTCCCCGTC TGCCCGAGGA CCGGCTGATG ACGCTGGTCG CAGGCATCCA TTCCTCCAAC
ACGGGCCTGA CGCTGCGCGA AATCGGCACC CAGCTGGAAA AGCTGCATGA GCGCACCCCA
CGCGGCGGCT CCAAATGGTC GCCCTCCTCC GTGAAGAACC TCATCGATCG CGCCCGACGT
TCCGGATTGA TCGCCGACGT CGACTTGACC GGCGCTGAGT AG
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| Protein sequence | MVANTNNRAS RPPQGRLIGY ARVSTDEQAT EAQEIDLRSA GCDVIVQEHG SGASRARPTL
SKLVREIGAG DTLVVVRLDR LARSVSHLLE VIEDLTERGA HFRSLHDPID TSTPQGMFSL
QVLGAVAQLE RALISERTKA GIRAAKSKGK LPGNPGIREK RPDMLARMTA AQKAAYGERV
QASANQWLPT VRRMRPDHTW DDIARMLKQR GLDWTPERLR RAVRWLVAER MADPALLRKS
PPRLPEDRLM TLVAGIHSSN TGLTLREIGT QLEKLHERTP RGGSKWSPSS VKNLIDRARR
SGLIADVDLT GAE
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