| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9003 |
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| Symbol | repC |
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| ID | 7367755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | + |
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| Start bp | 2556 |
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| End bp | 3833 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643644254 |
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| Product | replication initiation protein RepC |
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| Protein accession | YP_002542551 |
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| Protein GI | 222083148 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.854777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGCTCG GCCATATTGC AAGCCAGATG GCCGCAAAAG CGGTCGCGCC GGACACTGTC
GCCCACAAGT GGCAGGTCTT CCAGCACATC CGTGAAACCC GAGAACTGAT CGGCGCCACG
GACCGATCGC TCACGATCTT GAACGCGCTG TTGACGTTTC ACCCGGAAAC GGCACTGACC
GGAGATGCTG AGCTCATCGT GTGGCCGTCT AACGAGCAAC TGACGGCACG GGCCAACGGC
ATGCCCGCTA CGACGCTGCG TCGGCACATC GCCGTGCTCG TCGACTGCGG ATTAATCATA
CGTCGAGACA GTCCCAACGG CAAGCGGTTC GCTCGCAAGG GCAGAGGAGG GGAGGTCGAG
CAGGCCTACG GCTTCGATCT GTCGCCGATC GTCGCCCGAG CGGAAGAGTT CCAAGACCTC
GCCCTAGCGG TTCAGGCCGA AAAAAAGGCC TTCCGAGTCG TGAAGGAGCG CCTCACACTG
CTGCGGCGTG ACATCGTCAA GATGATCGAA ACAGGCATTG ACGAGGGTGT CCCTGGGAAC
TGGGGACGGG TCACTGAGAC CTATCAGGGC ATTATCGGCC GGTTGCCTCG CTCTGCGCCT
CGCCAGCTAG TAGAGAGGAT AGCGCAGGAG CTTCAGGAGC TCTGGACGGA CATCCGTGAC
GTATTGGAAA CATTCACAAA AACACAGAAT CTGGATGGCA ATGAGTCCCA TTCCGGTCGC
CACATACAGA ATTCAAATCC AGACTGTAAG TTTGAATCTG AATATGGCTT TCGAGAAAAA
GATGAAGCGG GCGGCGACGC TGCGGAAACC GACAATGTGC GGAGCTTGCC GAAACGCGAG
CTGCCCTTGG GGATCGTGCT AGATGCCTGC CCCGAAATGC GGGAACTGGC GCAAGGAGGG
ATAATCCGGC ATTGGCGCGA CTTGCTGGCA GCAGCGGAGC TTGCCCGGCC GATGCTGGGT
ATCAGCCCGA GCGCTTGGCG AGAGGCGCGA GAAACCATGG GTGAGCAGCA CGCCACCATC
ACGCTGGCGG CGATCTATCA GCGGGCCGGC CAGATCAACA ACGCTGGCGG TTATCTACGC
AGCCTGACCG ATCGGGCGAA GGGCGGGAAG TTTTCGACCT GGCCGATGGT CATGGCGTTG
CTCCGGGCGA AGTTGGACGA GCGGAAACAC GCGGCCAGCG CCGGAAAGCC GCGAACGGAT
GAATATCCCG AAGACGATAG CCGTGTCCAC GTGTCGGAAT CGCTTCTGAG AAGCCTTCAG
AAGCCGAGAT CGTGGTGA
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| Protein sequence | MTLGHIASQM AAKAVAPDTV AHKWQVFQHI RETRELIGAT DRSLTILNAL LTFHPETALT
GDAELIVWPS NEQLTARANG MPATTLRRHI AVLVDCGLII RRDSPNGKRF ARKGRGGEVE
QAYGFDLSPI VARAEEFQDL ALAVQAEKKA FRVVKERLTL LRRDIVKMIE TGIDEGVPGN
WGRVTETYQG IIGRLPRSAP RQLVERIAQE LQELWTDIRD VLETFTKTQN LDGNESHSGR
HIQNSNPDCK FESEYGFREK DEAGGDAAET DNVRSLPKRE LPLGIVLDAC PEMRELAQGG
IIRHWRDLLA AAELARPMLG ISPSAWREAR ETMGEQHATI TLAAIYQRAG QINNAGGYLR
SLTDRAKGGK FSTWPMVMAL LRAKLDERKH AASAGKPRTD EYPEDDSRVH VSESLLRSLQ
KPRSW
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