| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8325 |
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| Symbol | trbG |
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| ID | 7365274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 250013 |
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| End bp | 250867 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643641879 |
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| Product | conjugal transfer protein TrbG |
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| Protein accession | YP_002540176 |
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| Protein GI | 222080312 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000831167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATCA GACACAGAAG ACAACGGGCT ACGCTGGCCA TCGGCCTCTT GGTTTTTGCG
ATCGTCCCCT TGACCGTCCT CGACCCCCGG ACTGTGCTTG CCGCTGATGG TGTCACCGCC
AACGAGGCGA AAGGCATGGG GCTCTCGACC CAATGGCGCG GGTCGAAAGG CCTGGTCACC
AAGGGCGCGG ACGGTAAGGT GATCTTTCTC TATGGCGAGG TTCAGCCATC GGTCGTCTGC
TCACCGCTGC AGGTCTGCGA TATCGAACTT CAGGGCGGCG AGGTAGTGCG CGATGTGCTG
GTCGGCGATA CGGTCCGCTG GAAAGTGGAG CCGGCGACAT CGGGCGCGGC CGGGGGCCAG
GCCATCCATC TTATCGTCAA GCCATCCGAA CCGGGACTTG TCACCTCGAT GGTGGTGACC
ACATCCCGGC GGACATATCA TATCCAGCTC AAGTCGCATC CCACGCAATA TATGGCCCGC
GTCGGCTTCG AATACCCCGA GGATGTTTCC ACGAAACTCG CCGACGTCAA CGCGCGGCTT
GAAGCCAGTA CGATCCCCGG CGCCGGGGTG CCGGCGGAGC AGCTGAGCTT TTCCTATTCC
ATATCAGGCA GCGCCGGTTG GCGGCCGACA CGGGTCTATT CCGATGGCCT GAAAACCTAC
ATCCAGTTCC CGCGGTCGAT CTCGGGTCAG GATGCGCCGG TTCTCTTCGT CGTCTCCGGT
GGCCAGAACC GTATCGTCAA CTACCGCATG AAGAGCAATA TGATGGTGGC CGATTACAAC
ATCGATCGCG CTGTGCTCGT CTCAGGCGTC GGCTGGAAAC AACAAAAGGT AACGATCACC
AGGGGAGGGC GGTGA
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| Protein sequence | MNIRHRRQRA TLAIGLLVFA IVPLTVLDPR TVLAADGVTA NEAKGMGLST QWRGSKGLVT
KGADGKVIFL YGEVQPSVVC SPLQVCDIEL QGGEVVRDVL VGDTVRWKVE PATSGAAGGQ
AIHLIVKPSE PGLVTSMVVT TSRRTYHIQL KSHPTQYMAR VGFEYPEDVS TKLADVNARL
EASTIPGAGV PAEQLSFSYS ISGSAGWRPT RVYSDGLKTY IQFPRSISGQ DAPVLFVVSG
GQNRIVNYRM KSNMMVADYN IDRAVLVSGV GWKQQKVTIT RGGR
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