| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8324 |
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| Symbol | trbH |
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| ID | 7365273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 249537 |
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| End bp | 250013 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643641878 |
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| Product | conjugal transfer protein TrbH |
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| Protein accession | YP_002540175 |
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| Protein GI | 222080311 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.019351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGATTC TTGCCTTCAT TCGACGCCCC CTGAACCTTA TACCTAGCCT TGCTGCCGCC
TGCATCCTCG CCATCCTCCA TTCCGGGTGC CAATCGATCG ACACAGAAGG TCTTGTCGCC
AGCAACGCGC CGCCCGAACT CTCAGGACCA GCGGCGAGCG CCATTGCCGG TGACATGGTC
AGCCGCCTTG CCGAACAGAT CGGGCCGGAC AAGGCAACCG TTGCACTAAA GGTCGATACT
TCACCCTTCG GTCAGGCAAT GGAGGCGGCG CTGAAGGGAT GGGGTTATGC GGTCGTCACC
GACCAGAAGA CGGATAGCGG AACGACCGTC GTCCCACTTG CCTATGCGAT CATATCATTC
GACGGGCAGG TGCTGGCGCG CCTTTCGACC AACAGCGTCG AACTCGGCCG CGCTTACACG
GTGACTTCGA CCGGTGCCAC GCCGACGAGC GCGCTTGCGC TGATGCGGCG CGGGTGA
|
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| Protein sequence | MKILAFIRRP LNLIPSLAAA CILAILHSGC QSIDTEGLVA SNAPPELSGP AASAIAGDMV
SRLAEQIGPD KATVALKVDT SPFGQAMEAA LKGWGYAVVT DQKTDSGTTV VPLAYAIISF
DGQVLARLST NSVELGRAYT VTSTGATPTS ALALMRRG
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