| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8321 |
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| Symbol | noxB |
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| ID | 7365270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 246018 |
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| End bp | 247160 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643641875 |
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| Product | D-nopaline dehydrogenase |
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| Protein accession | YP_002540172 |
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| Protein GI | 222080308 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.869573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGGGATC TAGGGACGAG AGACATCGTG GTCGTTGGCG GCGGCCTCAT CGGTACAGCA
GTTGGTTTGG GCCTTGCGAC GCTCGGCGCC GATGTTGCTC TCCTAGAGGG CGAGGACACC
AATTTTCATG CTGCGCGCGG CAATTTCGGC TTGGTCTGGT CTCAGAGCAA GGGCGCGCGC
GGCCGCGATT ATGCCAGTTG GACCTGGAGC GCTGTCAAAG CATGGCCTGA GTTTGAGGCA
GATATCCGGC GCTTGAGCGG AATCGACACC CACTACCGTT CCGGGCTCGG TCTGTCGCTG
TGCCTTTCAG AGCAGGAATT CGAGAAGCGG GCAAAGCTGA TCAATCGCGT TGCCTCCTAC
GGATTGCCCG GGAGCGATGG CCGCATGATT GGCCGCAACG AGGTGCTTGA GATACTGCCT
GGCATTGGAC CAGATGTGGT GGGCGGCTCC CTTTCTACAC TTGATGGCGA TTGTCATTCG
CTCGCCCTTT ACCGGGGCTT ATACGGATCG TTCATAGCCG CGGGCGGCAA ACTGCGGAGT
GGCAGAGCTG TCGACAAGAT TGTCTCCCGT GGCAGTCACT ATGAGGTTTT TGCAGGGGAT
GTCGTTGTCC GCGGCCGAAA GGTAGTGATC GCTGCCGGGC TCGGAACGAA CGCACTTGCC
GTTCCTTTGG GATTTCGTTC CTTCGTGCGA CCGGAGAAAG GCGAAATCCT GGTAACCGAA
CGGATCAAGC CCTTCCTGCC AATTGTACTC GCATCACTGC GTCAGACCCC AGAGGGTACC
GTTCTGATGG GAGATACGAA GGAAGATGCC GGCCTCGATG ACCGCTCGAC GCAACGTGGC
ATGTCCCACC TCGCCAGCCG GGCGGTGAGA ATGTTTCCCC TGATCGGACA AAGCCGCGTC
ATGCGAAGCT GGGCTGCGCT GCGGGTGATG ACCAGCGACG GCGATCCAGT CTACGACGAG
TCGCCGACCC ACCCCGGCGT CTTCGTCGCT TCCACACATA GCGGCGTCAC TTTGGCGCCG
ATGCATTGCG GTTCTCTTGC GCGCTGGATT GCAGGTGACC AGAAGCCTCC GGAATTCCAG
TCCTTCAAGG CGTCTCGCTT CTTGGGCGCG GAGGTGGCGG AGGCTGCACA TGCCGATCAC
TAG
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| Protein sequence | MRDLGTRDIV VVGGGLIGTA VGLGLATLGA DVALLEGEDT NFHAARGNFG LVWSQSKGAR
GRDYASWTWS AVKAWPEFEA DIRRLSGIDT HYRSGLGLSL CLSEQEFEKR AKLINRVASY
GLPGSDGRMI GRNEVLEILP GIGPDVVGGS LSTLDGDCHS LALYRGLYGS FIAAGGKLRS
GRAVDKIVSR GSHYEVFAGD VVVRGRKVVI AAGLGTNALA VPLGFRSFVR PEKGEILVTE
RIKPFLPIVL ASLRQTPEGT VLMGDTKEDA GLDDRSTQRG MSHLASRAVR MFPLIGQSRV
MRSWAALRVM TSDGDPVYDE SPTHPGVFVA STHSGVTLAP MHCGSLARWI AGDQKPPEFQ
SFKASRFLGA EVAEAAHADH
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