Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_8320 |
Symbol | hyuA |
ID | 7365269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011982 |
Strand | - |
Start bp | 243894 |
End bp | 245924 |
Gene Length | 2031 bp |
Protein Length | 676 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643641874 |
Product | hydantoin utilization protein |
Protein accession | YP_002540171 |
Protein GI | 222080307 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCGAA TAGGCTTCGA TGTCGGCGGG ACCTTTACCG ACTTTACCGC AATTAACGTA AAGACCGGCG AGGCCAGTCA TTACAAAACC TCGTCCACGC CACATGACCC TTCAGAAGCG ATCGAGACTG GTCTAGCCTA TTTCATCAAC GAGCGTGGCT TTCGGCCGGA AGATATCGAA TTCGTCGGCC ATGGCACCAC AGTTGCGACC AACATGGTCA TCGAACGCCG TGGTGTACCA ACCGGCCTGA TCACGACGCG AGGCTGCCGT GACGTGTTGG AGATTGGCCG CCAAACCAGG CCAAACCTAT ACGACTACAG CGTTGTAAAA CCTGAACCGC TCGTTGAGCG ATGGATGTGC ATCGAGGTCG CGGAACGACT AAATGCCAAC GGCGACATGC TCGTCGCACT TGACGAGGAA GCTGTGCGAA ACGCAGCCGA GCAGATGAGG CAGGCGGGAA TGAAAGCCGT CGCCATCGGC TTCCTGCATT CTTACATTAA CGATGCGCAT GAACGTCGGG CTGCGGAGAT CGTACGCGAT GTACTGCCGG ACGCCTACAT CAGCATCTCT TCCGACATCC TTCCTGAATT CCGTGAATTC GAACGATTCT CGACCACGGT CATCAATGCA TATGTCGGTC CTCGAATGGA TCGCTACCTC CAGCGTTTCG TAGAACGGCT GAAGACGCTC GAAATCGCAT CTCCACCACG CACGATCCAT TCCAACGGCG GGCTGATGTC TGTCGACACG GTGCGTGCTT ATCCGGTGCG GACCTGCCTG TCAGGTCCAG CAGCAGGCGT TGTTGGAGCA GCTAAAGTTG CGCAGCGCTC TGGCTTCTCC AACATCATCA CCTATGATGT GGGAGGAACA AGCACGGACG TCTCGTTGGT GCTCGATGGG ACCCCTGCCT TTACGACCAG TCGTCTCGTT GCCGATTATC CGGTTCGCGT ACCGATGCTC GACATTCACG TCATCGGCGC CGGTGGCGGC AGTATCGCTG CAATCGATGA TGCGGGAGCG CTCAAGGTCG GCCCTCGTAG CGCCGGCGCA CACCCTGGTC CGATTGCCTA TGGGCGCGGC GGCACTGAGC CGACAATCAC CGACGCCAAT CTCGTCCTCG GCCGCCTCTC GTCCGACACC TTGCTTAGCG GCCGTATGAA GGTCGACACG GAGGCTGCGC GCCGGGCCAT CAATGAGCAG ATCGCTAGCC CCCTTGGTCT CAGCGTTGAA GAAGCGGCAT TGGGCATCAT TCGTATCGCT GTTGCCAGCA TGGGCCGCGC CATTCGGGCA GTGTCTACGG AGAAAGGTCA TAAGCTTTCG GAATTTGCTC TGTTCGCCTA TGGCGGCGCG GGTCCCTTGC ACGCAGGGGC AGTAGCACGC GAAGTCGGTC TCTCTGCCGT CCTCGTCCCA ACTCAGCCTG GCACGATGTG CGCGCGCGGC ATCCTGCTTT CTGACATCGG TTTCGACTTC GTCCGATCGG GCGTCTTCGA AGCGACGGAA GAGAGCTGGC CAAGCGTTCA TGCGCAATTC GAGCGTATGC AGGTCGAGGG TCAGGCATGG CTTGACGGGG AAAATGTCGC GGCAGACAAG AGGTCGATGT CTTATGTCAT CGACGCCCGC TACGATGGCC AGAACCATGA AGTCCAGGTC TTTATGCTGG ACGGAATCAA TACGTCCTAT CAGACTTTTG TGGAATCGTT TCAAGCGGCG CACCGCCATG AATATGGCTA CGATATCGAT GGCCGGGCCA TTGATGTCGT CAATTTGCGC CTCAGCGTTA GCGGTGCGGT CGCGGCCAAG GCTGATTCCG AACACCAGCC GGATGGTGGT GAAGGCAAGG TAGGATCGAG GCAGGTCTAC TTCGATAAAG GCTGGTTTGA GACAGCGATC TACAATCGCT CGGCTCTGCC TATCGGAGAG CCGGTTGAAG GACCCGCCAT CATTCAGGAA ATGAGTTCCA CCACTATCGT CGAACCTGGC CAGTCTGTGC GTGTTGATGC AACAGGCACT ATGATCATCG AGGTCCTCTA A
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Protein sequence | MYRIGFDVGG TFTDFTAINV KTGEASHYKT SSTPHDPSEA IETGLAYFIN ERGFRPEDIE FVGHGTTVAT NMVIERRGVP TGLITTRGCR DVLEIGRQTR PNLYDYSVVK PEPLVERWMC IEVAERLNAN GDMLVALDEE AVRNAAEQMR QAGMKAVAIG FLHSYINDAH ERRAAEIVRD VLPDAYISIS SDILPEFREF ERFSTTVINA YVGPRMDRYL QRFVERLKTL EIASPPRTIH SNGGLMSVDT VRAYPVRTCL SGPAAGVVGA AKVAQRSGFS NIITYDVGGT STDVSLVLDG TPAFTTSRLV ADYPVRVPML DIHVIGAGGG SIAAIDDAGA LKVGPRSAGA HPGPIAYGRG GTEPTITDAN LVLGRLSSDT LLSGRMKVDT EAARRAINEQ IASPLGLSVE EAALGIIRIA VASMGRAIRA VSTEKGHKLS EFALFAYGGA GPLHAGAVAR EVGLSAVLVP TQPGTMCARG ILLSDIGFDF VRSGVFEATE ESWPSVHAQF ERMQVEGQAW LDGENVAADK RSMSYVIDAR YDGQNHEVQV FMLDGINTSY QTFVESFQAA HRHEYGYDID GRAIDVVNLR LSVSGAVAAK ADSEHQPDGG EGKVGSRQVY FDKGWFETAI YNRSALPIGE PVEGPAIIQE MSSTTIVEPG QSVRVDATGT MIIEVL
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