Gene Avi_8320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_8320 
SymbolhyuA 
ID7365269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011982 
Strand
Start bp243894 
End bp245924 
Gene Length2031 bp 
Protein Length676 aa 
Translation table11 
GC content57% 
IMG OID643641874 
Producthydantoin utilization protein 
Protein accessionYP_002540171 
Protein GI222080307 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCGAA TAGGCTTCGA TGTCGGCGGG ACCTTTACCG ACTTTACCGC AATTAACGTA 
AAGACCGGCG AGGCCAGTCA TTACAAAACC TCGTCCACGC CACATGACCC TTCAGAAGCG
ATCGAGACTG GTCTAGCCTA TTTCATCAAC GAGCGTGGCT TTCGGCCGGA AGATATCGAA
TTCGTCGGCC ATGGCACCAC AGTTGCGACC AACATGGTCA TCGAACGCCG TGGTGTACCA
ACCGGCCTGA TCACGACGCG AGGCTGCCGT GACGTGTTGG AGATTGGCCG CCAAACCAGG
CCAAACCTAT ACGACTACAG CGTTGTAAAA CCTGAACCGC TCGTTGAGCG ATGGATGTGC
ATCGAGGTCG CGGAACGACT AAATGCCAAC GGCGACATGC TCGTCGCACT TGACGAGGAA
GCTGTGCGAA ACGCAGCCGA GCAGATGAGG CAGGCGGGAA TGAAAGCCGT CGCCATCGGC
TTCCTGCATT CTTACATTAA CGATGCGCAT GAACGTCGGG CTGCGGAGAT CGTACGCGAT
GTACTGCCGG ACGCCTACAT CAGCATCTCT TCCGACATCC TTCCTGAATT CCGTGAATTC
GAACGATTCT CGACCACGGT CATCAATGCA TATGTCGGTC CTCGAATGGA TCGCTACCTC
CAGCGTTTCG TAGAACGGCT GAAGACGCTC GAAATCGCAT CTCCACCACG CACGATCCAT
TCCAACGGCG GGCTGATGTC TGTCGACACG GTGCGTGCTT ATCCGGTGCG GACCTGCCTG
TCAGGTCCAG CAGCAGGCGT TGTTGGAGCA GCTAAAGTTG CGCAGCGCTC TGGCTTCTCC
AACATCATCA CCTATGATGT GGGAGGAACA AGCACGGACG TCTCGTTGGT GCTCGATGGG
ACCCCTGCCT TTACGACCAG TCGTCTCGTT GCCGATTATC CGGTTCGCGT ACCGATGCTC
GACATTCACG TCATCGGCGC CGGTGGCGGC AGTATCGCTG CAATCGATGA TGCGGGAGCG
CTCAAGGTCG GCCCTCGTAG CGCCGGCGCA CACCCTGGTC CGATTGCCTA TGGGCGCGGC
GGCACTGAGC CGACAATCAC CGACGCCAAT CTCGTCCTCG GCCGCCTCTC GTCCGACACC
TTGCTTAGCG GCCGTATGAA GGTCGACACG GAGGCTGCGC GCCGGGCCAT CAATGAGCAG
ATCGCTAGCC CCCTTGGTCT CAGCGTTGAA GAAGCGGCAT TGGGCATCAT TCGTATCGCT
GTTGCCAGCA TGGGCCGCGC CATTCGGGCA GTGTCTACGG AGAAAGGTCA TAAGCTTTCG
GAATTTGCTC TGTTCGCCTA TGGCGGCGCG GGTCCCTTGC ACGCAGGGGC AGTAGCACGC
GAAGTCGGTC TCTCTGCCGT CCTCGTCCCA ACTCAGCCTG GCACGATGTG CGCGCGCGGC
ATCCTGCTTT CTGACATCGG TTTCGACTTC GTCCGATCGG GCGTCTTCGA AGCGACGGAA
GAGAGCTGGC CAAGCGTTCA TGCGCAATTC GAGCGTATGC AGGTCGAGGG TCAGGCATGG
CTTGACGGGG AAAATGTCGC GGCAGACAAG AGGTCGATGT CTTATGTCAT CGACGCCCGC
TACGATGGCC AGAACCATGA AGTCCAGGTC TTTATGCTGG ACGGAATCAA TACGTCCTAT
CAGACTTTTG TGGAATCGTT TCAAGCGGCG CACCGCCATG AATATGGCTA CGATATCGAT
GGCCGGGCCA TTGATGTCGT CAATTTGCGC CTCAGCGTTA GCGGTGCGGT CGCGGCCAAG
GCTGATTCCG AACACCAGCC GGATGGTGGT GAAGGCAAGG TAGGATCGAG GCAGGTCTAC
TTCGATAAAG GCTGGTTTGA GACAGCGATC TACAATCGCT CGGCTCTGCC TATCGGAGAG
CCGGTTGAAG GACCCGCCAT CATTCAGGAA ATGAGTTCCA CCACTATCGT CGAACCTGGC
CAGTCTGTGC GTGTTGATGC AACAGGCACT ATGATCATCG AGGTCCTCTA A
 
Protein sequence
MYRIGFDVGG TFTDFTAINV KTGEASHYKT SSTPHDPSEA IETGLAYFIN ERGFRPEDIE 
FVGHGTTVAT NMVIERRGVP TGLITTRGCR DVLEIGRQTR PNLYDYSVVK PEPLVERWMC
IEVAERLNAN GDMLVALDEE AVRNAAEQMR QAGMKAVAIG FLHSYINDAH ERRAAEIVRD
VLPDAYISIS SDILPEFREF ERFSTTVINA YVGPRMDRYL QRFVERLKTL EIASPPRTIH
SNGGLMSVDT VRAYPVRTCL SGPAAGVVGA AKVAQRSGFS NIITYDVGGT STDVSLVLDG
TPAFTTSRLV ADYPVRVPML DIHVIGAGGG SIAAIDDAGA LKVGPRSAGA HPGPIAYGRG
GTEPTITDAN LVLGRLSSDT LLSGRMKVDT EAARRAINEQ IASPLGLSVE EAALGIIRIA
VASMGRAIRA VSTEKGHKLS EFALFAYGGA GPLHAGAVAR EVGLSAVLVP TQPGTMCARG
ILLSDIGFDF VRSGVFEATE ESWPSVHAQF ERMQVEGQAW LDGENVAADK RSMSYVIDAR
YDGQNHEVQV FMLDGINTSY QTFVESFQAA HRHEYGYDID GRAIDVVNLR LSVSGAVAAK
ADSEHQPDGG EGKVGSRQVY FDKGWFETAI YNRSALPIGE PVEGPAIIQE MSSTTIVEPG
QSVRVDATGT MIIEVL