| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8319 |
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| Symbol | hyuB |
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| ID | 7365268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 242167 |
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| End bp | 243891 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641873 |
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| Product | hydantoin utilization protein |
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| Protein accession | YP_002540170 |
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| Protein GI | 222080306 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.113582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACA CCGAAACACT TATCGACGCT GAGCGCATTG CCGATCCCAT CGCAATGGAG
GTTTTCACCA ACCGCCTGCT GGCAATCGCC GACGAGATCG CAAACGCAAT GATCCGCGCT
TCGTTTTCGT CCAACATCAA GGAGCGCAAG GATTGCTCTG TCGCGCTCTT CTCGTCCGAT
GGACGCCTTA TCGCGCAGGC TAGTCATATT CCGTTGCATC TCGGTTCGCT AATGGGCTCG
GTTCATGCGG TTCTAAAACG ATACTCTCTC CAGAAAATCA CCGCTGGCGA CGTCTTCCTC
TGCAACGATC CCTATGTTGC GGGCGGCACG CACACGCCGG ACATCTCGGT GATCACCCCG
GTGTTTCACG AGGGCAAAAT TCGATATTTC ACTGCGAATA TCGGTCACCA TTCGGATGTC
GGCGGCACTG TTCCTGGCTC GATCCACGGC GGCGCCATAT CGATCTTCGA GGAAGGTCTT
CGCCTCCCGG TCATGAAACT CTATCGGGCC GGTGTTCTCG ATGAAGATCT CCTGTCCATG
ATCTCGTTGA ACTCCCGGTC TCCAGAAGAG CGCTGGCTCG ATATCAAGGT GCAGGCGGCA
GCAAATGAAC GCGGGGCACG GCTGATGCTT GAGCTGACCG ACGCACTCGG TGCGGAGCAG
GTCACTCGTT CGATCGAGGA CGTCTTCGCC TATACCTCCG CCCGATTGCG CAACCGCATT
GCTGAGATGC AGGACGGAAC AGCTTCGTTC ACGTCTTCTA TCGAAAGCGA TGGTCTCGGC
GACACGCCGG TGAAGATCCA GGCGAATGTT ACCGTTTTGG GTTCGAAGCT TAGCGTCGAC
TTCAACGGCT CTGGTCCCCA GGCGCGCGGC GCGATGAACG TCGCAGAAAG CGCCCTCCAT
GCCTCCGTCT ATTACGTGGT CAAGACGTTG CTCGATCCCG GCCTCTTGCC GAATAACGGT
ATGTTCACAA ATATCGAGAT CACTGCGCCA GCGGGAAGCA TTGTAAACCC GTCGGCTCCT
GCGGCTGTCG GCGCTCGCTC CATCACCTGC AACAAGGTCG TCCGCGCACT GATTGGCGCT
TTCGCTCAGC TGTTGCCGCC CGAACGCGCA ATGGCGGCCG GACAGGATAT TGTTCCTGTG
ATGGTCTTCG CTGGCAAGCG ACGTGGCCGC AAGGATGGGT ACGTGTATCT CGAATCGATC
GGCGGTGGAT CGGGTGCGCG CCATGACGTC GATGGCATGG ACGGTGTCCA CGTCCACGTC
ACCAACACAT CAAACCTGCC GATCGAGCCG CTTGAGACCG AATATGATCT GATCGTCAAG
GAATATGCGC TGGTCAATGG CTCGGCGGGT GCGGGCGAAC ATCGCGGCGG GATGGGAATT
GCCCGCGAGA TAACGGCTCC CAACGGCAAT GTCATTTTCA CTGCCCGCTC GGATGGACAC
CGTGAAGGCG CTCCAGGTGC AGGCGGCGGT GGATCTGGAA GACCAGCGCG ATTGGTGATG
ACGGCCGCAA ACGGCGACGA AAAGTTGCTC AACCCGATGA TCGCAAACTT GCCGCTTCAA
CCGGGTGACA GCGTTCGCCT TGAAACCCCT GGCGGCGGCG GCTTTGGTGC CCCCGGCCTG
CGGAAGAACT CAGACCTCCG TCGTGACTTG CGCGATGGTC GGTTAAGTGC GGCGGAAAGC
GAGGCCCAAT ACGGCGCTTC CAAAACCGCG GAGGCGCGGC ACTAG
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| Protein sequence | MSNTETLIDA ERIADPIAME VFTNRLLAIA DEIANAMIRA SFSSNIKERK DCSVALFSSD
GRLIAQASHI PLHLGSLMGS VHAVLKRYSL QKITAGDVFL CNDPYVAGGT HTPDISVITP
VFHEGKIRYF TANIGHHSDV GGTVPGSIHG GAISIFEEGL RLPVMKLYRA GVLDEDLLSM
ISLNSRSPEE RWLDIKVQAA ANERGARLML ELTDALGAEQ VTRSIEDVFA YTSARLRNRI
AEMQDGTASF TSSIESDGLG DTPVKIQANV TVLGSKLSVD FNGSGPQARG AMNVAESALH
ASVYYVVKTL LDPGLLPNNG MFTNIEITAP AGSIVNPSAP AAVGARSITC NKVVRALIGA
FAQLLPPERA MAAGQDIVPV MVFAGKRRGR KDGYVYLESI GGGSGARHDV DGMDGVHVHV
TNTSNLPIEP LETEYDLIVK EYALVNGSAG AGEHRGGMGI AREITAPNGN VIFTARSDGH
REGAPGAGGG GSGRPARLVM TAANGDEKLL NPMIANLPLQ PGDSVRLETP GGGGFGAPGL
RKNSDLRRDL RDGRLSAAES EAQYGASKTA EARH
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