Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_8316 |
Symbol | noxA |
ID | 7365266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011982 |
Strand | + |
Start bp | 240275 |
End bp | 241684 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643641871 |
Product | D-nopaline dehydrogenase |
Protein accession | YP_002540168 |
Protein GI | 222080304 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACAAA GTTACGACCT GGCCATCATT GGTGCGGGCC CGGCAGGTAT GGCTGCCGCG ATCGAGGCGG ACGCGGCCGG ATTGACCGTT GCCCTTATTG ACGAGCAGCC GGCGCCAGGC GGGCAGATCT ATCGTTCTGT CGAAGCCGCG GACCACCAAC GCCTCGCTGT TCTTGGCAAA GACTACGCAG CTGGACTTGA TCTCGTCGCA GCCTTTCGTG CCAGCGGCAT AACCTATATT CCTTCAGGTA CTGTCTGGAA CATCGAGGAC AGTTATACGA TAGATTACGC AAGGGCAGGC ACGTCGGACC GGATCTCAGC GAAATCCGTA CTCGTCGCAA GCGGTGCCGT AGAGCGAGCA ATGCCACTTC CAGGTTGGAC CTTGCCAGGC GTTACAACGG CAGGCGCCCT CCAGATTCTG CTAAAGGCGC ACGGTGCCAT CAACGACGAT GTCGTACTGG CTGGGTCGGG GCCGCTTATC TATCTTATTG CGTTTCAGAT GATAAAAGCG GGCGCCCCAC CAAGGGCGAT CGTCGATATG GGGCAGTCGA TGCCCGTCCG GGCCGTGCTC AATCATCTAC CGGGCGCACT CAAGGGCTGG CGTTACCTTG CGAAGGGGCT CCGCCTTCTT CGCGACATCA AGAAAGCAGA CATACCGTTC TATCACAAAG CCAGCAATGT GCGCATCGAG GGCGAAGGAT CGGTGCAAGG TATCTCCTTC GATCATCGTG GCCGACCGAT TCATCTCGCC ACTTCATCGG TTGCCCTCCA TCAGGGCGTT GTCCCAAATC AGCAGATCAC CCGACTATTG CGTTGCAAAC ACGAATGGAA CGGCGATCAA CGCTGCTTCG TGCCAGTTCT TGATCACTTC GGCGAAAGCA GCGTTCCTGG TGTTTTTGTA GCCGGCGACG GCGCGGGGAT CGCCGGCGCG GTGTCAGCGG CGCTTCGCGG ACGTATCGCG GCTTTGAAGG TCGCGGAACG ATCGGGGCGC GGGAACGGCG AGCGGTTGAC GCAACTGATC GCGGAACTCG GCAAGGACAG TGCGGTAAGA CCTCTCCTTG AAAGCCTCTA TGCCCCTTCC GAGGAAGTCT TGTTCCCCGA TGACAAGACG ATCGTCTGTC GCTGCGAAGA GGTGACCGCT GGCGATATCC GTCGCAACAT TGCGCTCGGC GTACAAGGAC CCAATCAGCT CAAATCATTT CTTCGGTGTG GCATGGGGCC ATGCCAAGGT CGAGTTTGTG GTCTGCCCGT CACCGAAATC ATTGCGCGTG AGCGAGGCGA GACCCCGCAA ACCATCGACT ATTACCGCAT TCGACCGCCA TTGAAACCGC TTGTTCTTTC GGAACTTGCC GCGGTTCATG GCGAAGGAGC AATGAGCAAC ACAAAGAAGG AGACTGAGGT CCATGATTAA
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Protein sequence | MIQSYDLAII GAGPAGMAAA IEADAAGLTV ALIDEQPAPG GQIYRSVEAA DHQRLAVLGK DYAAGLDLVA AFRASGITYI PSGTVWNIED SYTIDYARAG TSDRISAKSV LVASGAVERA MPLPGWTLPG VTTAGALQIL LKAHGAINDD VVLAGSGPLI YLIAFQMIKA GAPPRAIVDM GQSMPVRAVL NHLPGALKGW RYLAKGLRLL RDIKKADIPF YHKASNVRIE GEGSVQGISF DHRGRPIHLA TSSVALHQGV VPNQQITRLL RCKHEWNGDQ RCFVPVLDHF GESSVPGVFV AGDGAGIAGA VSAALRGRIA ALKVAERSGR GNGERLTQLI AELGKDSAVR PLLESLYAPS EEVLFPDDKT IVCRCEEVTA GDIRRNIALG VQGPNQLKSF LRCGMGPCQG RVCGLPVTEI IARERGETPQ TIDYYRIRPP LKPLVLSELA AVHGEGAMSN TKKETEVHD
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