| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8307 |
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| Symbol | |
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| ID | 7365259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 231828 |
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| End bp | 232862 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641864 |
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| Product | ABC transporter substrate-binding protein |
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| Protein accession | YP_002540161 |
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| Protein GI | 222080297 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0387111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTATCA GATTCAAGAT CGGGGTCGCT TGTGGCGTTT CGACGCTGGC GCTCGCAATG
GCATCGGGGG CAGTAGCCCA GGATCAGCTG ATCATCGCAG GCTATGGCGG TTCCACCGAA
ACCATTATCC GGGAAAAGAT CCTTCCAAAA TTCGAAGCAG CTAACAATGT CAAGGTGACC
TACGTCGCCG GCAATTCGAC AGATACGCTG GCAAAGCTGC AGGCGCAGAA TGCCAATCAG
GAAATCGACG TAGCGCTGAT CGATGATGGT CCGATGGCAA GAGCGGTGTC GCTCGGCTTC
TGCGCCCCGA TCGCCGGCGT CGATTTTTCT ACCCTCTACG ACACTGCTGC TTTCCCGGAC
CACAAGGCAT CGGGGCTCGG CATTGTTGCC ACAGGCCTGA TGTACAATAA GAAGGTCTTC
GCCGACAATG GCTGGGCTGC TCCTACGTCG TGGAACGACC TGAAGGATCC GAAGTTCGCC
GGTAAGGTTG TCATTCCTCC CATGAACAAT GGCTATGGCC TCCTGACAGT TGTCATGCTC
GCCCGCATGA ACGGCGGCGG TGAGAAGAAC ATTGATCCCG GTTTTGCTGC GTTCAAAAAC
GATATCAACA AGAATGTCAT TGCCTATGAG CCGTCTCCCG CGAAAATGAC CGAGCTCTTT
CAGACAGGGC AAGCCGTCTT GGGCGTTTGG GGTACCGCTC GCGTGCAGGC GTTGGCCGCC
ACCGGCTTTC CCGTCGATTT TGTCTATCCG GTCGAAGGCG CGCCGGCCGT CATGACGGCA
ATCTGCCCGG TCGCCAAGAA ATCCGTCTCG CCACTGGCCC AGGCGTTCGT CAAGACTATG
CTGTCGAAGG AAGCCCAAGA AATTTTGGCG GAGGAAGCAG GTTCTGCTCC TGTCCTGAAG
GACGCTGTCG TAAAGTCTCC AGGAATGATG CCTTATGGCG ACGCAGCCAA GAAGCTCGTC
ACGGCGGATT GGGAAACCAT CAATGCCGCC CGTGACGACT GGAACAAGCA CTGGACTCGC
GAGATCGAGC GATAA
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| Protein sequence | MFIRFKIGVA CGVSTLALAM ASGAVAQDQL IIAGYGGSTE TIIREKILPK FEAANNVKVT
YVAGNSTDTL AKLQAQNANQ EIDVALIDDG PMARAVSLGF CAPIAGVDFS TLYDTAAFPD
HKASGLGIVA TGLMYNKKVF ADNGWAAPTS WNDLKDPKFA GKVVIPPMNN GYGLLTVVML
ARMNGGGEKN IDPGFAAFKN DINKNVIAYE PSPAKMTELF QTGQAVLGVW GTARVQALAA
TGFPVDFVYP VEGAPAVMTA ICPVAKKSVS PLAQAFVKTM LSKEAQEILA EEAGSAPVLK
DAVVKSPGMM PYGDAAKKLV TADWETINAA RDDWNKHWTR EIER
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