| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8306 |
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| Symbol | |
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| ID | 7365258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 230638 |
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| End bp | 231681 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641863 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002540160 |
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| Protein GI | 222080296 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.646948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCTATC TTCGTCTGGA TAGACTGCGC AAGGTCTACG GGCCCGCCGT CGCCGTAGAC
GGCATCAACC TCAATGTTGA AAAAGGGGAG TTCGTATCGC TCCTCGGCCC GTCCGGTTGC
GGGAAAACAA CCACCCTTCA GATGATTGCC GGGTTTGTGG AGCCGACGTC AGGCAGTATT
AGTCTCGATG GTGCCGAGCT TTTGAAGCTT CCGCCCAATC GCCGGGGCCT TGGAATCGTA
TTTCAGAGCT ACGCCCTGTT TCCGCATATG ACAGTTGCCC AAAACCTGTC TTTTGGGCTG
GAAATGCGCG GGGTGTCGAA GGCCGAAATA ACCAAGCGCG TCTCTGAGAT GCTCGATATT
GTTGGCCTTT CCGACAAGGC GGCTCGCTAT CCCCGCCAAA TGTCCGGCGG TCAGCAACAA
CGCGTTGCGC TCGGCCGCGC GCTCATCATA AAGCCTGCAA TCCTGCTTCT CGATGAGCCA
CTTTCCAATC TCGACGCAAA AATGCGCGAG GAAATGCAGA TCGAGTTGAG GCAGATACAA
CAGACCCTCG GCACGACGAC CGTTCTCGTT ACCCATGATC AGCACGAGGC TTTGGCTCTT
TCTGACCGTA TCGTTGTGAT GAGCGCTGCG AAAGTCGAGC AGATCGGCAC ACCCCAAGAC
GTTTACGAAA CTCCGGCCAC TCCTTTCGTG GCGTCGTTTC TGGGCAAGAC GAACGTCTTC
GAGGGAACAA CGTCCGCAGA CGGCCTGACG TTTGGCGATT ACACCGTTCC ATTCAGTCGT
ACCCACGAAG GCCGGGTGTC TTTCTCCGTC CGACCAGAGA AAATCTCGAT GTCGTCTGAG
ACCCAGCCTG GTTTGCGGGG TCGGGTGAAA ACGCGCGTCT TCCAGGGCGA CCACTGGCTC
CTCCAGATCG ATACGGCCGC AGGTCGCGCG ATTGTCGTCA GTCCAAATAA TGGCACTTTC
ATTCCTCTCG AAAACGCCGA GGTCTGTCTC ACCGTCAAGC CGGAAGACCT GATCGTCAGT
AAAGCGGCGG GGGAGCGGAT ATGA
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| Protein sequence | MSYLRLDRLR KVYGPAVAVD GINLNVEKGE FVSLLGPSGC GKTTTLQMIA GFVEPTSGSI
SLDGAELLKL PPNRRGLGIV FQSYALFPHM TVAQNLSFGL EMRGVSKAEI TKRVSEMLDI
VGLSDKAARY PRQMSGGQQQ RVALGRALII KPAILLLDEP LSNLDAKMRE EMQIELRQIQ
QTLGTTTVLV THDQHEALAL SDRIVVMSAA KVEQIGTPQD VYETPATPFV ASFLGKTNVF
EGTTSADGLT FGDYTVPFSR THEGRVSFSV RPEKISMSSE TQPGLRGRVK TRVFQGDHWL
LQIDTAAGRA IVVSPNNGTF IPLENAEVCL TVKPEDLIVS KAAGERI
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