Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_8295 |
Symbol | |
ID | 7365250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011982 |
Strand | - |
Start bp | 222853 |
End bp | 223242 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643641855 |
Product | D-vitopine dehydrogenase |
Protein accession | YP_002540152 |
Protein GI | 222080288 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTACAAA AATACTGCCT CCATATTTTT ATCGAATACC AACCCGGTTG CACATCCTCC TGGCATACTA GCGGCAAGAG TCGCGATGAA TGCGGGCTGA GCCCTCTCCC GAAATTCTAC CGGGGGTTTG TGCCGCAAGC GATCGAGCGT GTTCTCGCAT TAGACAATGA ACGCCTTGAG ATTGTTCGCG CGCTCGGTCA ACACTCTGAA ACAGATTTCG AATACTCGAA AAAATGGTAT GGAGGGCAGG CCCCAGCAAT GAACTCTGTT ATCGAGGAGG CCGGCCTTGT TCTCGAGGAG AACCTCTTTG AAACTGGCCG AACTCTTGCT TCGCTGGGGT TAGCTCGCGC GCCCCTGAAT CGCATCGTTG AGGCACTCAA TGGAAACTGA
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Protein sequence | MVQKYCLHIF IEYQPGCTSS WHTSGKSRDE CGLSPLPKFY RGFVPQAIER VLALDNERLE IVRALGQHSE TDFEYSKKWY GGQAPAMNSV IEEAGLVLEE NLFETGRTLA SLGLARAPLN RIVEALNGN
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