| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8278 |
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| Symbol | |
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| ID | 7365237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | + |
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| Start bp | 207335 |
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| End bp | 207958 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643641846 |
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| Product | virP |
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| Protein accession | YP_002540143 |
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| Protein GI | 222080279 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACGCCT ATAAGCTAAT AATATTTGAT TTTGATGGTA CATTGGCCGA CAGCGGCGGC
TGGATGATAA GCGCTCTGAG GGAAATGTCC GAACGTCACC GATTTATAAC GCCCAACGAC
ACTCAGATTG AATATCTGCG TGGCCTTTCA GTCTGCCAGG TTTTGAAATG GCTGAGAGTT
CCGATTTGGC GCATTCCTCT GATCGTGAAA GATTTGCGTG AACTGGCTCG CGAGGCCACG
TTCCATATAT TCCCTAGGAC AGAAAAGGTC TTATTTCTCC TCCAAGATCA AGGGGTGGAG
CTTGCAATCT TAAGTTCGAA CAGCATTGAA AATATTCAGC GCGTGCTCGG GCCATTGGAG
GGATACTTTG CTCATATAGA GGGTAGCTCG CCGATATTTG GGAAGGGCAA AAGGATCAAT
AAGATACTTC GTCGGTGTAA TAAGTCTCGG AATGAAGTCC TTCTTGTCGG AGATGAGGTA
CGTGATATTG AGGCGGCGAC GAGCCAAAAT ATTGCCTCCG CAGCAGTAAC GTGGGGTTAT
GCCAAAAGAG AAGCTTTGGC GTACAGCAAT CCCACTCACA TTCTCGACGA TATTGAGGAA
TTAATAGACT TGAAACCTAT ATAG
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| Protein sequence | MDAYKLIIFD FDGTLADSGG WMISALREMS ERHRFITPND TQIEYLRGLS VCQVLKWLRV
PIWRIPLIVK DLRELAREAT FHIFPRTEKV LFLLQDQGVE LAILSSNSIE NIQRVLGPLE
GYFAHIEGSS PIFGKGKRIN KILRRCNKSR NEVLLVGDEV RDIEAATSQN IASAAVTWGY
AKREALAYSN PTHILDDIEE LIDLKPI
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