| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8262 |
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| Symbol | |
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| ID | 7365226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 195790 |
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| End bp | 196767 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641836 |
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| Product | integrase/recombinase |
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| Protein accession | YP_002540133 |
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| Protein GI | 222080269 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.19921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGGAG ACTTTGTGGC TCACGGCGCT GTGTTGCGTC GCTATGATCG CCGGGGCGAT
AAGCTCGCAG CCCATCAGGC TGAGCTGATC GGTAAATTCC AGGCCGCGTT ACGTGCCGAG
GGTTGTGCAG TTTCGACGGT GCGCACGTAT GGGACGCTGG CCGGAGAGTT TCTTTCGTTT
GTGGACACGC GCGGCCGACT TACTGAATGC GATGCCAGAA CAGTCGAGGC GTTTGTTGCC
ACCTTGTCCG GATACCAAGC AAAGACGGTC GAACAAAAGC TGTGCGCGGT CCGCTCTTTT
CTCAGATACG CGGAGCGCCA GGGGCAGGTC AATGCCGACG TATTGAAGGC TGTCCCGGCG
GTGAAGTCCA GCAAGCATGC CAGAGTTCCA TCGGTGTGGG ATCCCGCCGA TGTGGCCAGG
ATTTTGGATG CCATCGATCA AGGCAATCCC AGCGGCAAAA GGGACTACGC GATTATTACG
TTGGTCACGC GGCTCGGTCT GCGGAGCATC GACGTCAAGC GTCTGGAATT GGATGATTTC
GACTGGCCGG GCAATCGGCT CTGGGTGAGG CAGACCAAGA CCGGGCACCG CATACAACTG
CCGCTATTGA AAGACGTTGG CTGGGCGATA ATCAACTACA TCCGTCATGG CCGACCGTCT
ACCGATTGTC GGCAGGTGTT CTTGCGCCAT ACCACGCCGG TTGGGCCGTT TTCTGACCAG
GATCATCTGC ACCAGATCCT GTGCAAACAC GCACGAGTGG CGCGTGTGAC ACTAAGCGAC
CACCGTCGCC ACGGCATGCA TTCGCTGCGG CACACGTTGG CGACCCGATT GATGGAAGGT
GGAACGCCGA TCGAAGAGAT CGCCGACATT CTTGGACATC AGTCGGTGGG CACGACGGGC
GTTTATTTGA AGACATCACT GGGGCTGCTG CGTCAGTGCG CACTCAACCC TGACGCCACT
TCCGAGGAGG TTCTGTGA
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| Protein sequence | MLGDFVAHGA VLRRYDRRGD KLAAHQAELI GKFQAALRAE GCAVSTVRTY GTLAGEFLSF
VDTRGRLTEC DARTVEAFVA TLSGYQAKTV EQKLCAVRSF LRYAERQGQV NADVLKAVPA
VKSSKHARVP SVWDPADVAR ILDAIDQGNP SGKRDYAIIT LVTRLGLRSI DVKRLELDDF
DWPGNRLWVR QTKTGHRIQL PLLKDVGWAI INYIRHGRPS TDCRQVFLRH TTPVGPFSDQ
DHLHQILCKH ARVARVTLSD HRRHGMHSLR HTLATRLMEG GTPIEEIADI LGHQSVGTTG
VYLKTSLGLL RQCALNPDAT SEEVL
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