| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8255 |
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| Symbol | tnp |
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| ID | 7365220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 191202 |
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| End bp | 191570 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641830 |
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| Product | transposase |
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| Protein accession | YP_002540127 |
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| Protein GI | 222080263 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0325797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATTTGC TCGCCGCATC GTTGGCTGGA GAGCAAGTAG AACCACACAC ACACACCAGT
TTTGTCCTTG ATGCTCTGGA GCAGGCGCTT CATGATCGGC GGCCCGTCAA ACGCGGCGGA
CTCGTCCACC ACTCGGACAG GGGTGTTCAA TACGTGTCGA TCAAGTATTC CGAGCGGCTG
GCGGAAGCCG GTATCGAGCC CTCCGTCGGC AGCGTTGGAG ATAGTTACGA CAACGCTCTC
GCAGAAACGA TAAACGGTCT TTACAAGGCT GAGGTCGACG AGGGCCGTGG CGAAACTTCG
AAGCCGTTGA GTTCGCAACA CTCGAATGGG TGGACTGGTT CAACCATCGA AGGCTTCTGG
AGCCCATAG
|
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| Protein sequence | MHLLAASLAG EQVEPHTHTS FVLDALEQAL HDRRPVKRGG LVHHSDRGVQ YVSIKYSERL
AEAGIEPSVG SVGDSYDNAL AETINGLYKA EVDEGRGETS KPLSSQHSNG WTGSTIEGFW
SP
|
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