| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8254 |
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| Symbol | tnp |
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| ID | 7365219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | + |
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| Start bp | 189783 |
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| End bp | 190805 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643641829 |
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| Product | transposase |
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| Protein accession | YP_002540126 |
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| Protein GI | 222080262 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0843801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCC GCTGGCCCGA TCCCGACCGC GCGATCATTG ACCGCTATGT TGCGATACTT
GATCTGCACA GCATGAAAAG CCGAGCCTGT TATCGGCAGG TCCTGCATGA CTCCCAGGAT
GTCGCCGAAC GTTACGATGC ACTTGGTCAG GAAGTGCTGA TTGCGTGGCT GCGTAAATCG
GCCGAATGCT GGGCAGCGAC GACGCGGCTA CACCGCACCC GTATCATTGA CCGTTTCCTC
GAACGCCTGG TGGAAATCGG CGCGATCGAA CACAATCCCG TCACCGCTCT GCGCGATGTG
TGCAATATCA AGCAGTGCAT GCCGATCTGG CGGGCATTGG CATCGCGGGA TCCCGAACAG
GCTCTCGCCG AACTGCGCCA GCCCAGGCCG TTCGCCAGCG TGCTGGGCGA AATGATGGCC
GAGCATGTCG GGATGATGCG GCGCAGGGGA TACAAATACA CTTCGCAGCC TCTGTTGCTC
TTGCGGTTCG ACCGGTTCCT GCAGCTGCAT CCGGGACCGG AGGCCGAACC GCTGAGCGCC
ATGATCGATC GATGGGCGGC AACGCATGTC AGGCTGCTGA CCGAGAAGAT CGATGGCCTG
ATGCTGAAGC TTCGAGAAGC TACCAAGGCG AATGAAGATA TGCGTCGACT TTGCACCGTT
CCCGGCGTCG GCCCCGTGAC CGCCGGCGCG ATCCTCGCGT TTGCTCCCGA TCTTCGTGCA
TTCAAGAGCG GCCGGAACTT TGCTGCTTGG CTCGGCCTTG TGCCCAGGCA GCACTCAACG
GGTGGCAAGA CACGACTGGG CGGTGTCAGC AAGATGGGGC AGACCGATAT TCGAAAGCTC
CTCATTGTCG GAGCCATGAG CATGATCCGC TGGATCGTGC GCAAGGGCGT GTTACCGGAT
AACTGGTTGG GAAGCATTCT GGACCGAAAG CCTCGAATGG TGGCTGCTGT CGCGCTCGCC
AATAAGATGG CGCGCATCAT TTGGGCAATG ATGACCAGGG AGCAGAATTA CAGAATGGCG
TGA
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| Protein sequence | MTARWPDPDR AIIDRYVAIL DLHSMKSRAC YRQVLHDSQD VAERYDALGQ EVLIAWLRKS
AECWAATTRL HRTRIIDRFL ERLVEIGAIE HNPVTALRDV CNIKQCMPIW RALASRDPEQ
ALAELRQPRP FASVLGEMMA EHVGMMRRRG YKYTSQPLLL LRFDRFLQLH PGPEAEPLSA
MIDRWAATHV RLLTEKIDGL MLKLREATKA NEDMRRLCTV PGVGPVTAGA ILAFAPDLRA
FKSGRNFAAW LGLVPRQHST GGKTRLGGVS KMGQTDIRKL LIVGAMSMIR WIVRKGVLPD
NWLGSILDRK PRMVAAVALA NKMARIIWAM MTREQNYRMA
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