Gene Avi_8238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_8238 
Symbol 
ID7365125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011982 
Strand
Start bp174421 
End bp174783 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content59% 
IMG OID643641820 
Producttransposase 
Protein accessionYP_002540117 
Protein GI222080253 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCA TGGAGATCAT GTCCGGCAGT GAGCGTCGGC GACGCTGGTC TGACGCGGCG 
AAACTGAAGA TATTGGCGGA AGCTGATCAA CCTGGTGTTC GCATTGGTGA TGTGGCTCGC
CGGCATGATA TTTACCCATC CCAGATCCGT TTGTGGCGGC AGTCCTTCAG CTATGTCGGT
CGACCGGCGA TGTTCCTTCC GGTGGAAATC ACCGAGGAGG TGAGCGCTAC ACCGGGACCT
GACACGCCAC CGACGCCAGC GGTTATTGAG ATCTCGCTAC GAAACGGTCG ATGCTTGAGG
GTTCCGGCTG ACATAGAGCT GAGGATGCTC GGGTCGTTGA TCGCGTGCGT GGAGGCGGCA
TGA
 
Protein sequence
MARMEIMSGS ERRRRWSDAA KLKILAEADQ PGVRIGDVAR RHDIYPSQIR LWRQSFSYVG 
RPAMFLPVEI TEEVSATPGP DTPPTPAVIE ISLRNGRCLR VPADIELRML GSLIACVEAA