| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8231 |
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| Symbol | |
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| ID | 7365120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | + |
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| Start bp | 170939 |
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| End bp | 172600 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643641817 |
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| Product | transposase |
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| Protein accession | YP_002540114 |
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| Protein GI | 222080250 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3436] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCAAC CTATTGATCT CAGCTTGTAT CCGGACCTTC CATCAGAGGT CGCCAAAGCC
TTCGCGGAGA TGCAGTTCGA GCTGTCGGTC GAGCGTGCAG CACGTCAGCA TGAGCAGGCT
GTGGTGGCCG AAAAGGATTT GTTCATCGCC GAGTTGAAGG AGCTGATCGA GACGCTTGAG
GGTCAGGTTC ATGAATATCG GCGCGCGAAG TTCGGGCCGA AATCGGAAAA GCTCGATCCG
GCGCAGATGG AACTGGCGTT GGAAGAGCTT GAAACGGCGA TTGCCGAAAC ACAGGCGCGG
ATTGCCGCCG TTGAGAAAAA GATCGAAGCC AGTGCAATCA ATCCTGGAGA GGTTGGCGAT
CCGGACAAGG CCGTTTCTCG CAAGGAGCGC AAGGCCCGTG CACTGCCTGA ACACCTGCCG
CGGGTCGAGC GCGTGATCGA GCCCGAGAGC ATCGTTTGCC CCTGCGGTTG CGGCAACATG
GTGCGGATCG GCGAGGAACG GCTCGACCGG GTCCCGGCGC GCTACGAGGT GATCGTCACG
ATCCGCCCGA AATACGCATG CCCCAAGGGG CGAACGGGCG TTGTCCAGGC CAAAGCGCCG
GCACATCTTT TGGAAGGGAG CTGGCCGACC GAAGCCCTTC TGGCGGAAAT TGCCGTCTCC
AAGCATTCCG AACATATGCC GCTCAACCGG CAGGCTGAGG TCATGGCGCG ACACGGGGGG
CCGATAGACC GCCCGGTCCT GGCCGATTGG ATGGGGCGCA CGGGCAGCGA AATCCGGTCG
GTGGTTGACC ATATGGCTAA ACAGCTTCTG GGGGAAAGCA CGCGGCTCTA TGTCAACGAG
ACGACCGCCC CGGTGCTGGA TCCGGGGCGA GGCAAGACGA AGACGGGCTA TCTCCGGGCC
GTGCTGCGTG ACGACCGCGG CTGGAACGGT TCTGCGCCAT CAGGTGTGGT GTTCCATTAT
CGGCCTGGGC GTAAAGGCGA CTATGCCGCC GAAATCCTCG AAGGATTTAA CGGCACGATC
CAGGTCAATG CCTACGGTGG TTACTCTCAC CTTGCCACGT CGGACCGTGT GGGCGGCGAT
CCCTGGAAAC TGGCTTTCTG TTGGGCACAC GGGCGCAGAA AGCTGATCAA GGCTGCGCCA
AAGAGCGGAT CACCCATCGT TGATGAAGCG CTCATTCGCA TCGCCGCGCT CTACAAGATC
GAAGACAGTA TTCGAGGCAA TGAGCCCGAA CATCGTCGGG CAGTCCGACA GGAGCTGTCG
CTCCCGTTGG TGGACAAGTT CTTCACCTGG ATCGCGGCTC AGGCTGCACG TGTCTCACGC
AAGTCAGATC TTGGAAAAGC CTTGGCATAC ATGCTGACAC GGCAAGACGG CTTCAGGCTG
TTCTTGGACG ACAGCCATGT CGATATTGAC TCCAACCTGG TGGAAAACGC GATCCGCCGC
CCGGCCATGA ACCGCCGCAA TGCGCTCTTT GCGGGCCACG ATGAAGGGGG CCGAAATTGG
GCTCGGTTTG CCAGCTTGAT CGGCACATGT AAAATGAATG GAATTGAGCC TTACGCCTAT
CTGTGCGACC TCTTCACCCG CCTCGCAAAC GGCCACATCG CCAAAGACAT CGATGCCCTA
ATGCCTTGGG CCTATGCCGC CCGCATAAAG GCCTCACAAT GA
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| Protein sequence | MSQPIDLSLY PDLPSEVAKA FAEMQFELSV ERAARQHEQA VVAEKDLFIA ELKELIETLE
GQVHEYRRAK FGPKSEKLDP AQMELALEEL ETAIAETQAR IAAVEKKIEA SAINPGEVGD
PDKAVSRKER KARALPEHLP RVERVIEPES IVCPCGCGNM VRIGEERLDR VPARYEVIVT
IRPKYACPKG RTGVVQAKAP AHLLEGSWPT EALLAEIAVS KHSEHMPLNR QAEVMARHGG
PIDRPVLADW MGRTGSEIRS VVDHMAKQLL GESTRLYVNE TTAPVLDPGR GKTKTGYLRA
VLRDDRGWNG SAPSGVVFHY RPGRKGDYAA EILEGFNGTI QVNAYGGYSH LATSDRVGGD
PWKLAFCWAH GRRKLIKAAP KSGSPIVDEA LIRIAALYKI EDSIRGNEPE HRRAVRQELS
LPLVDKFFTW IAAQAARVSR KSDLGKALAY MLTRQDGFRL FLDDSHVDID SNLVENAIRR
PAMNRRNALF AGHDEGGRNW ARFASLIGTC KMNGIEPYAY LCDLFTRLAN GHIAKDIDAL
MPWAYAARIK ASQ
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