| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8214 |
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| Symbol | virC1 |
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| ID | 7365105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | + |
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| Start bp | 157457 |
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| End bp | 158152 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643641802 |
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| Product | putative crown gall tumor protein VirC1 |
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| Protein accession | YP_002540099 |
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| Protein GI | 222080236 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1192] ATPases involved in chromosome partitioning |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.144693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACTTC TGGCTTTTTG CTCGTTTAAA GGAGGCGCCG GCAAGACGAC GGCGCTCATG
GGCCTTTGTA CTGCTTTTGC AAGAGACGGC AAACGAGTGG CTCTTCTCGA CGCCGATGAG
AACCGGCCTT TAACGCGCTG GAAAGAAAAC GCCATACGCA GCAATACCTG GGATAGATCC
TGCGAGGTGT ACGCTGCAGA AGAAATGTCG CTACTTGAAG CGGCTTATGA GGACGCCGAG
CTTCGGGAAT TTGATTATGC GTTGGCCGAT ACGCATGGTG GTTCGAGCGA GCTCAACAAC
ACTATCATCG CTAGCTCAAA CCTGCTTTTG ATCCCCACAA TGTTAACTCC ACTCGATATC
GATGAGGCAC TTTCGACATA CCGCTATGTC ATCGAACTGC TGCTGAGCGA GAACTTGGTC
ATTCCGACCG CAGTGTTGCG CCAGCGAGTC CCAGTGGGGC GATTAACCAC GTCGCAGCGC
GCGATGTCCA ACATGCTGGC GAACCTGCCT GTCGTGCAAT CTCCAATGCA TGAGAGAGAC
GCATTCGCCG CAATGAAGGA ACGTGGCATG TTGCATCTCA CATTGTTAAA CACAACAAAT
GATCCGACGA TGCGCCTCCT TGAGCGGAAC CTCAGAATTG CGATGGAGGA ACTCGTGACA
ATTTCAGAGC TAATTGGCAA AACCTTGGGA AATTGA
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| Protein sequence | MKLLAFCSFK GGAGKTTALM GLCTAFARDG KRVALLDADE NRPLTRWKEN AIRSNTWDRS
CEVYAAEEMS LLEAAYEDAE LREFDYALAD THGGSSELNN TIIASSNLLL IPTMLTPLDI
DEALSTYRYV IELLLSENLV IPTAVLRQRV PVGRLTTSQR AMSNMLANLP VVQSPMHERD
AFAAMKERGM LHLTLLNTTN DPTMRLLERN LRIAMEELVT ISELIGKTLG N
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