| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8181 |
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| Symbol | |
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| ID | 7365084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | + |
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| Start bp | 127519 |
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| End bp | 128400 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641786 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002540083 |
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| Protein GI | 222080220 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.116217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAGCT CCAACGTAAC GCTAAAGCGC TCCGAGAGCC GGCTCGAAAA GACCCAAGCC
GTCATTCGCC GGGTCAACTT CTCCACCTGG GCAGGTTTGC TCATCGTCGT TCTCCTCGTT
CTGGGTGCGA TATTCGCTCC ACAACTGTCG CCTTATCCGC CCGCAAAACA GAACATCGTC
GACCAGCTCG CTTCGCCGAG TGCTGCCCAC ATCTTTGGTA CCGACCAATT CGGCCGAGAT
ATCTGGACCC GCATGCTCTA CGGGGCGCGC TACTCGCTGA TCATCGGCTT CCTGGCCGTT
GTGGTTGCCA TGGTCATTGG CACGTTCATC GGAATGATTG CAGGTTTCAG GGGCGGCCGT
CTCGACATCG TCTTGATGCA AATCATGGAC GTCGTTCTGG CATTCCCTTC GCTCATTCTG
GGCATCGCAC TCGTTGCGCT TATGGGTGCG ACAACGACCA ATATCGTTGC CGCGATTGCC
TTTACTTCGA TCCCGGCCTT TGCCCGCGTC GCCCGCGCTG CGGTCATTAC CCAGCGCGAC
CGCGAATATG TGCAAGCCTG CCGCGCGATG GGCTTTTCTT CAAACCGAAC ACTCTATCGG
CATATCCTTC CAGCCATACT TCCCGAAATT ATGGTTATGG CTTCTCTCTG GATGGCCAAC
GCGGTCAGAA CGGAAGCCTC TTTGGCCTTT GTCGGCCTTG GAATCGCTCC GCCGGCTCCG
ACATGGGGCG GAATGGTGCG CGACGGCTTT GAAAACATTC TCAGCTCGCC GCACCTTGCT
CTGTTTCCTA GCCTTGGCAT CCTTCTCCTC GTCCTGGCTT TCAACCTCAT GGGCGATGGT
CTTCGCGATC TCATCGATCC GCGTTTGAAG GATGCTTCCT GA
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| Protein sequence | MTSSNVTLKR SESRLEKTQA VIRRVNFSTW AGLLIVVLLV LGAIFAPQLS PYPPAKQNIV
DQLASPSAAH IFGTDQFGRD IWTRMLYGAR YSLIIGFLAV VVAMVIGTFI GMIAGFRGGR
LDIVLMQIMD VVLAFPSLIL GIALVALMGA TTTNIVAAIA FTSIPAFARV ARAAVITQRD
REYVQACRAM GFSSNRTLYR HILPAILPEI MVMASLWMAN AVRTEASLAF VGLGIAPPAP
TWGGMVRDGF ENILSSPHLA LFPSLGILLL VLAFNLMGDG LRDLIDPRLK DAS
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