| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8176 |
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| Symbol | hyuA |
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| ID | 7365081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 123085 |
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| End bp | 125130 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643641783 |
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| Product | hydantoin utilization protein |
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| Protein accession | YP_002540080 |
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| Protein GI | 222080217 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCATTC GTATAGGTTC CGATACTGGC GGCACGCACA CAGACCTTGT GCTGCTCGAC
GATGATCAGG CGAAGATCGT CACATTGAAG GTTCCGACCA CGCCGGAAGA TCTCAGCAAT
GGTATCGCCA AGGGGATCGA AACAATTGTC GAGCGCGCCG GCAGCCAGAT GAGCGAGGTT
GATCGCTTCG TCTATGGTAC GACACTCGTC ACCAACCTCA TCGTCGAAGA GCAGCAAGTC
GATATCGGCC TCATCACGAC CGGTGGCTTC CGCGATGTTC TGGAAATCGG CAGGGCATCG
CGCCGCCCGA ATGTCTACGA TATCCACTGG CGCCCGCCGA CTGCTCTGAT CTCGCGCGAC
CTGCGCGTGA CCGTCAACGA GCGCATTTCA GCAGACGGAT CGGTCATAAC GCCGATCGAC
GACACCGATA TCGCTGAACG CCTTTCCGAA CTGAAGTCCA AAGGGGTTCG CTGCGTCGCC
GTCTGCCTGA TGAACTCCTA CACCAACCCG GAACACGAAC AGCGGATCGG TAAGGTCGCG
GCAGAGAAGT TTCCGGATCT TGCGATCTCG CTGTCTTGCG AGGTTGCCCG CGAGTTTCGC
GAATACGAGC GGACCAGCAC CACAGCGATC AATGCATTCG TTGGTGGTCC TCTGACACGC
CACCTCGACG GTCTGGCTGC CGCGCTTGCC GCAAAGGGGA TAACGCCTGC TCCCTATATC
ATCCGGGGCA ATGGTGGGGT GATGTCCTTC ACCTCGGCCA AGAAGCTTCC CGCGGCACTG
ACGCATTCCG GTCCGATGGG CGGCATTATT GGCGGCGCCG CACTCGCGGA AAAGGCTGGC
GTCAACAAGA TCATCACATT GGACATGGGC GGCACGAGTG CCGACGTATC CCTGCTCACC
GACGGCAAGG CAGAGATGAC GACCCGATCG AGCGTCGGCC GTCACCCGCT CCTTCTCCCG
ATGCTCGACC TCATCACCAT TGGCGCAGGC GGTGGCTCGA TCGCCTGGGT CGATCAGGGC
GGCGCGCTGC GTCTCGGCCC GCGCAGCGCG GGATCCGTTC CTGGTCCGGC CTGCTATGGT
CAGGGCGGCG AAAACCCGAC GGTCACCGAC TCCAACCTTT ACGGCGGTCG CCTCAATCCG
GAATACTTCC TTGCCGGCGC CCGAAAGCTG CATCCTGCGA AGTCTCGCGA AGCCATCTTG
CGCAAAGTCG CCGAACCGTG CGGCATCTCC CTTGATGCCG CAGCGAGCGG CATCATGGCC
CTTGCCGAGG CGCATATGGT CAACGCGATC AAGCTCATCA CCGTCCAACG TGGACTTGAT
CCGCGAGACT ACACGCTTGT CGGCTTCGGT GGTGCCGGAC CCCTTCACAC CCTCCGCTTA
GCTGAAGAAC TCGGGATCCG CTCGGCTCTC ATTCCCCCTG CACCGGGCAA TCTCTCTGCA
CTCGGCATGT TGACGGCTCA GGTTCGTCAC GATCTTGTCC GTACCAAGCT TGCCTATCTC
GGCGAAGTGG ATGCTGCGGA ACTGTCGGCA GGGTTTGATG AGCTGATCGA GCAAGGTGAA
AAGGCTCTCG CGGACGAAGA CATCGCGGCT GGCACGTCTC AATACGTGAC GAGCCTCGAT
CTGCGTTACA AGGGACAGAA TTTCGAGCTC AATCTCGAAC TTCCCGCCGG CGATATGCAG
GCCGCGCTGG ACGCACTTCA GGCGCGCTTC GCAGAACGTC ACAAGCAGAT GTACGGCTAT
GACAACCCCG GCAAGCCGAT CCAGATCGTC AACATGCGCG TGGCTGCCAT GTCGACGAAA
CCTGACTTCG TATGGCCGAC ATTCCCGACC GAGGCGGGTG GCAAAGCCAC CGTCGTCAGC
CGACGCAAGG TGCTGATCGA CGCCGGTCAC TGGGAAGAGC TGCCGATCTA TCGGTTGGAC
GACCTGCGCG AGGGCTACAT CTTCCCCGGC GCTTCGATCG TCGAATATCC CGGTTCCACA
CTTTTCGTTC CGCCTGGCTG GACAGCCCGC TGCGATGCCT ACCGCATCCT CCATCTGGAA
CGCTGA
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| Protein sequence | MGIRIGSDTG GTHTDLVLLD DDQAKIVTLK VPTTPEDLSN GIAKGIETIV ERAGSQMSEV
DRFVYGTTLV TNLIVEEQQV DIGLITTGGF RDVLEIGRAS RRPNVYDIHW RPPTALISRD
LRVTVNERIS ADGSVITPID DTDIAERLSE LKSKGVRCVA VCLMNSYTNP EHEQRIGKVA
AEKFPDLAIS LSCEVAREFR EYERTSTTAI NAFVGGPLTR HLDGLAAALA AKGITPAPYI
IRGNGGVMSF TSAKKLPAAL THSGPMGGII GGAALAEKAG VNKIITLDMG GTSADVSLLT
DGKAEMTTRS SVGRHPLLLP MLDLITIGAG GGSIAWVDQG GALRLGPRSA GSVPGPACYG
QGGENPTVTD SNLYGGRLNP EYFLAGARKL HPAKSREAIL RKVAEPCGIS LDAAASGIMA
LAEAHMVNAI KLITVQRGLD PRDYTLVGFG GAGPLHTLRL AEELGIRSAL IPPAPGNLSA
LGMLTAQVRH DLVRTKLAYL GEVDAAELSA GFDELIEQGE KALADEDIAA GTSQYVTSLD
LRYKGQNFEL NLELPAGDMQ AALDALQARF AERHKQMYGY DNPGKPIQIV NMRVAAMSTK
PDFVWPTFPT EAGGKATVVS RRKVLIDAGH WEELPIYRLD DLREGYIFPG ASIVEYPGST
LFVPPGWTAR CDAYRILHLE R
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