| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8174 |
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| Symbol | hyuB |
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| ID | 7365080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 121315 |
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| End bp | 123072 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643641782 |
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| Product | hydantoin utilization protein |
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| Protein accession | YP_002540079 |
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| Protein GI | 222080216 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.246451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACCA CTACCGAGAA CACCCCCGCC GCAAGCGTTG ATCCAGTAAC GCTTGAAATC
GTTCGCAACG CACTGACCTC GATCGCCGAA CGCAATGCCC ATCGCATGAT CCGCGCATCG
ACGTCGATCA TCGTCAAGGA AATGGAAGAT TGCTCCGCTG CCGTCTTCGA CGGACAGGGA
CGCCTCTTGG CGGAATCTGC GACTATTCCA ATCCACCTCA ACTGCACCGG CGTTTGCCTG
CGGACCATTC TTGAACAGTA CCACCCGCCG GAAACATGGC GCCCGGGCGA CATCGTCATT
ACCAACGACC CCTATGCGGG CGGTGCCTCG ATGTCGACGG CCCATACGAA CGACTATGTC
GTGTTCATGC CCGTGTTTTT CGAGGACTTA CTGGTCGGCT TCACAGGCCT GATGGTCCAC
CATCAGGAAA TCGGCGCCAT GAACATGGCG ACCCGCGGCT GGAACCTGGA GATCTGGCAG
GAGGGCCTGC GCGTTCCTCC GATGAAGATC GGCGAAAACG GGATCGTCGA CGAAAGATGC
ATGCGCATCA TCCTCAATAA CACCCGCCTT CCCGACAACA TGGAAAACGA CCTCTTCGCG
CAGGTCGCAT CAGTGGCTGC GGCCGCCGAA GACATGAAAG CCATGTTCGA CCGCTACGGC
CGCGAAACGC TCTTGCGTTG CTTCGAAGCG CTGATCGACT ATTCAGAGCA GCGTACCCGC
GCAGAAATCT CGCAAATCCC GGACGGTGTC TACGAACACG AGGAACTCAT CCTCGATGAC
GGCGCCAAGA GTGGACCGTA CAAGCTGAAG CTCGCCATCC ACAAGACTGG CTCCGACATC
CTCTTCGACT TCACCGGCAC CGATCCGCAG ATCCGCGGAC CGATCAACGC CCCGCTCGCC
ACGACCTGGG CGGCTATCTT CTACGCGATG CGTTGTGTGA CCGACCCTTC GATTCCGTCG
ACAGAAGGGA ACAAGCGCCC ATTCAAAGTC ATCGCACCGG AAGGCACGCT GGTAAACGCC
AAGAAACCTG CGGCTGTCTA CCAGCGCATG GTGGTGTGCC ACAGCCTGGT GGACCTCGTG
ATGGGTGCGC TTTCGCAGAT CGTGCCGGAA CGCGTCATGG GCGACTCTTG TGGATGCCTT
TATAACTTCA CCTCAGCGAG GGAGCGCGAC ACGGGCAATC CGAGCGTATT CGGCGAAGTG
GTACCGGGCG GACTTGGTGC AACGTCCAAG GCCGACGGCA TCGACGTCAT GTCTTGCCAC
GTCACCAATT GCCCGATCCC TCCGATTGAA GCGACCGAGG CCGAATGCCC GGTTCTTTAT
GTCCAGCGCG AGCTTCAGTC TGGAACTGGA GGCGCCGGCA AATGGCGCGG CGGCGTCGGT
CAGGTCCTGG CCTATAAGGT GCTGGGCGAC CTGGCGGAAC TCCAGCATAC CTCCCAGAAA
TCCGTCACAC TCCCCCAGGG TGTGGCTGGC GGCTTCCCAG GTGGCGGCGG GCGTTGGGTG
ATTAACGAAG GAACACCGAA CGCACGAGTG CTCGAGCATT CGATCGGCGA ACTCGAAATG
CTCGACTATG GCGACGTCGT GACCCACTAC ACGCCGGGCG GCGGTGGTTT CGGCAATCCT
CTCGAGCGTG ATCCAGCTTT GGTCCTGCGC GATGTCCGTC ATGGCCTCGT GACCCGCGAG
CAGGCCGAGA AAGTCTATGG CGTGAAGGTC GGCGTCGATC TCAAGGAATG GACCCCGACA
AACGATCGAG CAGCTTGA
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| Protein sequence | MDTTTENTPA ASVDPVTLEI VRNALTSIAE RNAHRMIRAS TSIIVKEMED CSAAVFDGQG
RLLAESATIP IHLNCTGVCL RTILEQYHPP ETWRPGDIVI TNDPYAGGAS MSTAHTNDYV
VFMPVFFEDL LVGFTGLMVH HQEIGAMNMA TRGWNLEIWQ EGLRVPPMKI GENGIVDERC
MRIILNNTRL PDNMENDLFA QVASVAAAAE DMKAMFDRYG RETLLRCFEA LIDYSEQRTR
AEISQIPDGV YEHEELILDD GAKSGPYKLK LAIHKTGSDI LFDFTGTDPQ IRGPINAPLA
TTWAAIFYAM RCVTDPSIPS TEGNKRPFKV IAPEGTLVNA KKPAAVYQRM VVCHSLVDLV
MGALSQIVPE RVMGDSCGCL YNFTSARERD TGNPSVFGEV VPGGLGATSK ADGIDVMSCH
VTNCPIPPIE ATEAECPVLY VQRELQSGTG GAGKWRGGVG QVLAYKVLGD LAELQHTSQK
SVTLPQGVAG GFPGGGGRWV INEGTPNARV LEHSIGELEM LDYGDVVTHY TPGGGGFGNP
LERDPALVLR DVRHGLVTRE QAEKVYGVKV GVDLKEWTPT NDRAA
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