Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_8158 |
Symbol | potG |
ID | 7365069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011982 |
Strand | + |
Start bp | 107614 |
End bp | 108747 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643641771 |
Product | ABC transporter nucleotide binding/ATPase protein (putrescine) |
Protein accession | YP_002540068 |
Protein GI | 222080205 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAACG ATGAAATGAG CAAACCGCCC AAAACGCGGC AGACGGCCGT GGAACTGGTC GATGTCTGCA AGGTGTTCGA GACCTCGGTT ACGCCTCCGG CCTATGCTGT GGACCATCTC AGCCTAAAGA TAGCTTCGGG TGAGTTCTTT ACCTTTCTCG GTCCTTCTGG CTGCGGAAAG ACCACGACGC TGCGGATGAT CGCAGGCTTC GAAAGCCCGT CTGCAGGGGA AATCCTGCTC GACGGCCGCG ACGTTTCGGG GTTGCCAGCC CATCTGCGGA ACACCAATAC AGTTTTTCAA AGCTATGCGC TGTTTCCGCA TCTTTCGGTC GAGGACAACG TCGCGTTCGG TCTCTCGGTA AAACGAGTTC CCCGCAGTGA ACGGAACGAC CGTGTCGCAG CTGCGCTTGA TCTGGTGCGC ATGCGTCACG CCGCCGGGAG AAAGCCGTCG CAACTGTCCG GTGGTCAACA GCAACGCATC GCATTGGCGC GCGCCCTGGT CAATGAACCC TCCGTTCTCC TGCTAGACGA GCCGTTCGGC GCCCTCGATC TCAAGCTCCG GCGCGAAATG CAGATCGAGG TCAAGGAGAT GCAGCGCCGG CTTGGCATTA CGTTCATCTT CGTCACACAT GACCAGGAGG AAGCGTTAAC GATGTCGGAT CGCATCGCTG TGATGAGCGC TGGGGTAATT CAACAGGTTG ATGACCCTGT AGGGATCTAT GAGCGCCCCG CCGATCGGTT CACCGCAAGT TTCATCCGCG ATATGAATAT GCTTCCTGCG AAAGTCGTGG AGCGTCAAGA CGACGTTTTT GAAGTTCTGG CAGCAGAAAC CCGATTGAAA CTGAAATGTA CAGCTGGATT GGTCGTCAAT GCGGATTGCA CGGTCGCGAT GCGGCCAGAA GCCTTGACGT TCACTCGTAG GGAGGCCGAC GACGTCGTCT TTACTGGTCA GATTGAAAGT GACGTCTATG TCGGGGCCGA CCGTCTCTAC TCTATTCGTC TCAACGGGGG GGCGGCAATA GTCGCGCGCG TTCGTAATAC GCGAGAGCAA CGTTTGCTAC GCGCTGGCGA GACGGTCCAT ATGTTTTGTC CGGGATCGGC GATACATCTT CTTTGTGATC AAGACAGAAG GTGA
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Protein sequence | MSNDEMSKPP KTRQTAVELV DVCKVFETSV TPPAYAVDHL SLKIASGEFF TFLGPSGCGK TTTLRMIAGF ESPSAGEILL DGRDVSGLPA HLRNTNTVFQ SYALFPHLSV EDNVAFGLSV KRVPRSERND RVAAALDLVR MRHAAGRKPS QLSGGQQQRI ALARALVNEP SVLLLDEPFG ALDLKLRREM QIEVKEMQRR LGITFIFVTH DQEEALTMSD RIAVMSAGVI QQVDDPVGIY ERPADRFTAS FIRDMNMLPA KVVERQDDVF EVLAAETRLK LKCTAGLVVN ADCTVAMRPE ALTFTRREAD DVVFTGQIES DVYVGADRLY SIRLNGGAAI VARVRNTREQ RLLRAGETVH MFCPGSAIHL LCDQDRR
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