Gene Avi_8158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_8158 
SymbolpotG 
ID7365069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011982 
Strand
Start bp107614 
End bp108747 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content57% 
IMG OID643641771 
ProductABC transporter nucleotide binding/ATPase protein (putrescine) 
Protein accessionYP_002540068 
Protein GI222080205 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAACG ATGAAATGAG CAAACCGCCC AAAACGCGGC AGACGGCCGT GGAACTGGTC 
GATGTCTGCA AGGTGTTCGA GACCTCGGTT ACGCCTCCGG CCTATGCTGT GGACCATCTC
AGCCTAAAGA TAGCTTCGGG TGAGTTCTTT ACCTTTCTCG GTCCTTCTGG CTGCGGAAAG
ACCACGACGC TGCGGATGAT CGCAGGCTTC GAAAGCCCGT CTGCAGGGGA AATCCTGCTC
GACGGCCGCG ACGTTTCGGG GTTGCCAGCC CATCTGCGGA ACACCAATAC AGTTTTTCAA
AGCTATGCGC TGTTTCCGCA TCTTTCGGTC GAGGACAACG TCGCGTTCGG TCTCTCGGTA
AAACGAGTTC CCCGCAGTGA ACGGAACGAC CGTGTCGCAG CTGCGCTTGA TCTGGTGCGC
ATGCGTCACG CCGCCGGGAG AAAGCCGTCG CAACTGTCCG GTGGTCAACA GCAACGCATC
GCATTGGCGC GCGCCCTGGT CAATGAACCC TCCGTTCTCC TGCTAGACGA GCCGTTCGGC
GCCCTCGATC TCAAGCTCCG GCGCGAAATG CAGATCGAGG TCAAGGAGAT GCAGCGCCGG
CTTGGCATTA CGTTCATCTT CGTCACACAT GACCAGGAGG AAGCGTTAAC GATGTCGGAT
CGCATCGCTG TGATGAGCGC TGGGGTAATT CAACAGGTTG ATGACCCTGT AGGGATCTAT
GAGCGCCCCG CCGATCGGTT CACCGCAAGT TTCATCCGCG ATATGAATAT GCTTCCTGCG
AAAGTCGTGG AGCGTCAAGA CGACGTTTTT GAAGTTCTGG CAGCAGAAAC CCGATTGAAA
CTGAAATGTA CAGCTGGATT GGTCGTCAAT GCGGATTGCA CGGTCGCGAT GCGGCCAGAA
GCCTTGACGT TCACTCGTAG GGAGGCCGAC GACGTCGTCT TTACTGGTCA GATTGAAAGT
GACGTCTATG TCGGGGCCGA CCGTCTCTAC TCTATTCGTC TCAACGGGGG GGCGGCAATA
GTCGCGCGCG TTCGTAATAC GCGAGAGCAA CGTTTGCTAC GCGCTGGCGA GACGGTCCAT
ATGTTTTGTC CGGGATCGGC GATACATCTT CTTTGTGATC AAGACAGAAG GTGA
 
Protein sequence
MSNDEMSKPP KTRQTAVELV DVCKVFETSV TPPAYAVDHL SLKIASGEFF TFLGPSGCGK 
TTTLRMIAGF ESPSAGEILL DGRDVSGLPA HLRNTNTVFQ SYALFPHLSV EDNVAFGLSV
KRVPRSERND RVAAALDLVR MRHAAGRKPS QLSGGQQQRI ALARALVNEP SVLLLDEPFG
ALDLKLRREM QIEVKEMQRR LGITFIFVTH DQEEALTMSD RIAVMSAGVI QQVDDPVGIY
ERPADRFTAS FIRDMNMLPA KVVERQDDVF EVLAAETRLK LKCTAGLVVN ADCTVAMRPE
ALTFTRREAD DVVFTGQIES DVYVGADRLY SIRLNGGAAI VARVRNTREQ RLLRAGETVH
MFCPGSAIHL LCDQDRR